RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR1P1Q8NH06 330 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 OR4C12Q96R67 309 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 LINC00574Q9H8X3 128 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 IDI2-AS1Q9NZ38 188 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 RAMP3O60896 148 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 CCL3L1P16619 93 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 BRWD1-AS2P59051 145 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 PARD6GQ9BYG4 376 aaPredicted RBP14□□□□□ -0.17
PCDHB17P-201ENST00000539533 LINC00473A8K010 186 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 GPR12P47775 334 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 MEF2CQ06413 473 aaPredicted RBP13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 ADIRFQ15847 76 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 CT45A1Q5HYN5 189 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 SPANXN5Q5MJ07 72 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 CT45A3Q8NHU0 189 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 SMIM7Q9BQ49 75 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 IFI27L2Q9H2X8 130 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 RAB9BQ9NP90 201 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 NAT8Q9UHE5 227 aa13.99□□□□□ -0.17
PCDHB17P-201ENST00000539533 A6NNC1 897 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 C17orf98A8MV24 154 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 CLDN1O95832 211 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 PMS2P11Q13670 270 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 NCR3LG1Q68D85 454 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 C1orf229Q6ZS94 237 aaPredicted RBP13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 TAF15Q92804 592 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 GAB2Q9UQC2 676 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 CDKN1AP38936 164 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 RELQ04864 619 aaPredicted RBP13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 MSMO1Q15800 293 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 RPL39P5Q59GN2 51 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 CYP2G1PQ6ZSU1 146 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 LHX4Q969G2 390 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 DOPEY1Q5JWR5 2465 aa13.98□□□□□ -0.17
PCDHB17P-201ENST00000539533 UBE2L5PA0A1B0GUS4 154 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 GCGP01275 180 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 MEF2BQ02080 365 aaPredicted RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZNF816Q0VGE8 651 aaPredicted RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 C16orf82Q7Z2V1 217 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZNF714Q96N38 554 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 XKRY2A2RUG3 117 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 IGKV1D-33P01593 117 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 IGKV1-33P01594 117 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 PFN1P07737 140 aaKnown RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 GNG10P50151 68 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 SLC38A11Q08AI6 406 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 CATR1Q13166 79 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 RPP25LQ8N5L8 163 aaKnown RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 NEU4Q8WWR8 484 aaPredicted RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 PYGO2Q9BRQ0 406 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 SNHG12Q9BXW3 62 aa13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 RPUSD1Q9UJJ7 312 aaKnown RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 UTP20O75691 2785 aaKnown RBP13.97□□□□□ -0.17
PCDHB17P-201ENST00000539533 NDUFS7O75251 213 aa13.96□□□□□ -0.17
PCDHB17P-201ENST00000539533 KBTBD11O94819 623 aa13.96□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZNF439Q8NDP4 499 aa13.96□□□□□ -0.17
PCDHB17P-201ENST00000539533 GAL3ST2Q9H3Q3 398 aa13.96□□□□□ -0.17
PCDHB17P-201ENST00000539533 PPP1R14DQ9NXH3 145 aa13.96□□□□□ -0.17
PCDHB17P-201ENST00000539533 DUTP33316 252 aaKnown RBP13.96□□□□□ -0.18
PCDHB17P-201ENST00000539533 ZNF66Q6ZN08 573 aa13.96□□□□□ -0.18
PCDHB17P-201ENST00000539533 NECAP1Q8NC96 275 aa13.96□□□□□ -0.18
PCDHB17P-201ENST00000539533 HSD17B10Q99714 261 aaKnown RBP13.96□□□□□ -0.18
PCDHB17P-201ENST00000539533 ZNRD1Q9P1U0 126 aa13.96□□□□□ -0.18
PCDHB17P-201ENST00000539533 M0R1X1 148 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 FSTL3O95633 263 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 BSXQ3C1V8 233 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR8G2PQ6IF36 304 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 ZNF841Q6ZN19 808 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 RPUSD4Q96CM3 377 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 TIMM9Q9Y5J7 89 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 TACC2O95359 2948 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 AKAP6Q13023 2319 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 ITGB1BP1O14713 200 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 S1PR2O95136 353 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 RAB7AP51149 207 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 RPL23P62829 140 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM14EPQ6UXP3 125 aa13.95□□□□□ -0.18
PCDHB17P-201ENST00000539533 DOCK11Q5JSL3 2073 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 SAA2-SAA4A0A096LPE2 208 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 SOX15O60248 233 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 KRASP01116 189 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 SAA2P0DJI9 122 aaPredicted RBP13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 HNF4GQ14541 408 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 LYG1Q8N1E2 194 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR51G1Q8NGK1 321 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 FAM216AQ8WUB2 273 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 FAM90A26D6RGX4 464 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM250H0YL14 139 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 H7BYZ3 331 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 ZNF25P17030 456 aaPredicted RBP13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 G6PCP35575 357 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 GALR1P47211 349 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 PSMB3P49720 205 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 MRPS11P82912 194 aaKnown RBP13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 CENPVQ7Z7K6 275 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms