RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 LINC00336Q6ZUF6 198 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 OR10W1Q8NGF6 305 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 CHRDL1Q9BU40 450 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 DUSP21Q9H596 190 aa10.77□□□□□ -0.69
CSTF3-204ENST00000524556 C15orf62A8K5M9 175 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 IGLL5B9A064 214 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 DEFB4AO15263 64 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 RBFOX2O43251 390 aaKnown RBP eCLIP10.76□□□□□ -0.69
CSTF3-204ENST00000524556 TNFSF12O43508 249 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 TAS2R31P59538 309 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 MSMO1Q15800 293 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 SLC25A24Q6NUK1 477 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 GVQW1Q8N7I0 195 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 GDPD1Q8N9F7 314 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 NUDCD2Q8WVJ2 157 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 RNF2Q99496 336 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 MGLLQ99685 303 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
CSTF3-204ENST00000524556 CCL28Q9NRJ3 127 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 ANXA10Q9UJ72 324 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 TPRKBQ9Y3C4 175 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 ETV7Q9Y603 341 aa10.76□□□□□ -0.69
CSTF3-204ENST00000524556 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
CSTF3-204ENST00000524556 RGS10O43665 173 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 HPRT1P00492 218 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 SERPINE2P07093 398 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 FGF2P09038 288 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 NQO2P16083 231 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 RCN1Q15293 331 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
CSTF3-204ENST00000524556 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 TMEM235A6NFC5 223 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 C11orf94C9JXX5 98 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 SULT1C2O00338 296 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 CHEK1O14757 476 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 CASQ2O14958 399 aaPredicted RBP10.74□□□□□ -0.69
CSTF3-204ENST00000524556 XRCC3O43542 346 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 SSX5O60225 188 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 TRAPPC2P0DI81 140 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 TRAPPC2BP0DI82 140 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 OR13C7P0DN81 318 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 RAB3BP20337 219 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 TFPI2P48307 235 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 WT1-ASQ06250 92 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
CSTF3-204ENST00000524556 ZNF773Q6PK81 442 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 HSD17B13Q7Z5P4 300 aaPredicted RBP10.74□□□□□ -0.69
CSTF3-204ENST00000524556 ZBTB34Q8NCN2 500 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
CSTF3-204ENST00000524556 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 TEX50A0A1B0GTY4 177 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 MRPS14O60783 128 aaKnown RBP10.73□□□□□ -0.69
CSTF3-204ENST00000524556 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
CSTF3-204ENST00000524556 MYL9P24844 172 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 GNG2P59768 71 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 TMEM187Q14656 261 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 NR2C2APQ86WQ0 139 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 UBAC2Q8NBM4 344 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 TMEM116Q8NCL8 245 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 CCDC90BQ9GZT6 254 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 HRH4Q9H3N8 390 aa10.73□□□□□ -0.69
CSTF3-204ENST00000524556 F11RQ9Y624 299 aaKnown RBP10.73□□□□□ -0.69
CSTF3-204ENST00000524556 K7EIM0 57 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 CTSGP08311 255 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 FCGR2CP31995 323 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 CATR1Q13166 79 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 Q56UQ5 140 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 OR1L8Q8NGR8 309 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 OR13F1Q8NGS4 319 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 VCXQ9H320 206 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
CSTF3-204ENST00000524556 IGKV3-7A0A075B6H7 116 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 PPYP01298 95 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 PTHLHP12272 177 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 ARPC4P59998 168 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 PRSS48Q7RTY5 328 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 GBGT1Q8N5D6 347 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 Q8NAQ8 132 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 OR10C1Q96KK4 312 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 CMTM3Q96MX0 182 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 SLC5A7Q9GZV3 580 aa10.71□□□□□ -0.69
CSTF3-204ENST00000524556 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 SCGNO76038 276 aa10.7□□□□□ -0.7
CSTF3-204ENST00000524556 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms