RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PDCD1LG2Q9BQ51 273 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 OVOL2Q9BRP0 275 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CHST5Q9GZS9 411 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 HRH4Q9H3N8 390 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 SRD5A3Q9H8P0 318 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 PARP11Q9NR21 331 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 RBFOX1Q9NWB1 397 aaKnown RBP3.69□□□□□ -1.82
SDCBP-207ENST00000520168 RDH8Q9NYR8 311 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 PEMTQ9UBM1 199 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 FBXL17Q9UF56 701 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 IKZF2Q9UKS7 526 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 DHDHQ9UQ10 334 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 V9GY05 133 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 IGHV7-81A0A0B4J1V7 117 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 IGHV3-72A0A0B4J1Y9 119 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 A0A0J9YWU9 116 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 A0A1B0GTI1 187 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 OR11H12B2RN74 326 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 H3BUA1 57 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 NBR2O15453 112 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PLA2G10O15496 165 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 LYRM1O43325 122 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 OR2A4O95047 310 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 IFNA21P01568 189 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PPBPP02775 128 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ISG15P05161 165 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 CD2P06729 351 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PET100P0DJ07 73 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 CD37P11049 281 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ATF1P18846 271 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 GZMHP20718 246 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 HLA-DMAP28067 261 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 DUSP1P28562 367 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 OR3A3P47888 321 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 REG1BP48304 166 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 RFX2P48378 723 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 TPPP2P59282 170 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 NANOS3P60323 173 aaKnown RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 BLOC1S1P78537 153 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 MRPS10P82664 201 aaKnown RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 KLF5Q13887 457 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ATXN7L3Q14CW9 347 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ARL6IP1Q15041 203 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 RNF151Q2KHN1 245 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 RNF212Q495C1 297 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 COX19Q49B96 90 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 C19orf54Q5BKX5 351 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 UBE2NLQ5JXB2 153 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PXDC1Q5TGL8 231 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM244Q5VVB8 128 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 GLT8D1Q68CQ7 371 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ZNF660Q6AZW8 331 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 Q6ZWC4 215 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SLC16A13Q7RTY0 426 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 LYG2Q86SG7 212 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SCARB1Q8WTV0 552 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PHLDA1Q8WV24 401 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 DEDD2Q8WXF8 326 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 CACNG8Q8WXS5 425 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SPSB1Q96BD6 273 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SMIM12Q96EX1 92 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 S100A16Q96FQ6 103 aaKnown RBP3.68□□□□□ -1.82
SDCBP-207ENST00000520168 C8orf49Q96NF6 230 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 OR14A2Q96R54 314 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 PDCD10Q9BUL8 212 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 GGTLC1Q9BX51 225 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 RAB9BQ9NP90 201 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 BIN3Q9NQY0 253 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 COPZ2Q9P299 210 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 IL36RNQ9UBH0 155 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 CKLFQ9UBR5 152 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 SLC23A1Q9UHI7 598 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 KCNIP3Q9Y2W7 256 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ETV7Q9Y603 341 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 ALG5Q9Y673 324 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 R4GMQ9 66 aa3.68□□□□□ -1.82
SDCBP-207ENST00000520168 MEIKINA0A087WXM9 373 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 LOC102724200A0A096LPH7 203 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-207ENST00000520168 TEX13DA0A0J9YY54 714 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-207ENST00000520168 A0A1W2PPK0 400 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 NAP1L6A6NFF2 107 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 PRSS29PA6NIE9 313 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 PRR32B1ATL7 298 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 TSTD3H0UI37 97 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 DEGS1O15121 323 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 SYT7O43581 403 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 ORC5O43913 435 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 NDUFA3O95167 84 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 IGHV3-11P01762 117 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
SDCBP-207ENST00000520168 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
SDCBP-207ENST00000520168 UBCP0CG48 685 aaKnown RBP3.67□□□□□ -1.82
SDCBP-207ENST00000520168 GTF2F2P13984 249 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms