RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 TRBV7-1A0A0A6YYK4 115 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TEX13DA0A0J9YY54 714 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 A0A1B0GU03 582 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PP11 408 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PRX2 142 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 UBE2QL1A1L167 161 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 XKRY2A2RUG3 117 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 FAM172BPA6NC97 362 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CRYM-AS1A6NIL9 109 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SNRPGP15A8MWD9 76 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 H3BUX3 64 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 PROP1O75360 226 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 KBTBD11O94819 623 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR2A4O95047 310 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CDS2O95674 445 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 C8orf88P0DMB2 117 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ANXA3P12429 323 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 GNB3P16520 340 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TNFSF8P32971 234 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 PCP4P48539 62 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CEBPDP49716 269 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 CCR6P51684 374 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 HERV-K104P61576 105 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 NCS1P62166 190 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 POLR2GP62487 172 aaKnown RBP eCLIP2.22□□□□□ -2.05
MCF2-208ENST00000519895 RELQ04864 619 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 KIAA0141Q14154 515 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 GAGE13Q4V321 117 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 LDLRAD2Q5SZI1 272 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TMEM182Q6ZP80 229 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 CENPVQ7Z7K6 275 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 STPG2Q8N412 459 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR4M1Q8NGD0 313 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR5D18Q8NGL1 313 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 MCFD2Q8NI22 146 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 NDNFQ8TB73 568 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 NEK7Q8TDX7 302 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CCDC107Q8WV48 283 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SPACA5Q96QH8 159 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SPIN2AQ99865 258 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SPIN2BQ9BPZ2 258 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 GINS4Q9BRT9 223 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 GGACTQ9BVM4 153 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 PARD6GQ9BYG4 376 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 MALRD1Q5VYJ5 2156 aa2.21□□□□□ -2.05
MCF2-208ENST00000519895 TRAV30A0A087WSZ9 112 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 IGHV7-81A0A0B4J1V7 117 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 A8MWP6 167 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 CHST1O43916 411 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 RAMP3O60896 148 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 NDUFS6O75380 124 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 MED6O75586 246 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 PGLYRP1O75594 196 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 SCTP09683 121 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 RCC1P18754 421 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 GNRHRP30968 328 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 SSTR5P35346 364 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 OR3A3P47888 321 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 VBP1P61758 197 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 EDDM3AQ14507 147 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 INSL4Q14641 139 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 RNASE10Q5GAN6 216 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 AADACL3Q5VUY0 350 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 STEAP1BQ6NZ63 245 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 ZNF343Q6P1L6 599 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 ACSM6Q6P461 480 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 SLC35E3Q7Z769 313 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 OR52L2PQ8NGH6 319 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 OR1L8Q8NGR8 309 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 RNASEH2CQ8TDP1 164 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 CXorf58Q96LI9 332 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 FAM210AQ96ND0 272 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 CIB3Q96Q77 187 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 MRPL20Q9BYC9 149 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 CHIAQ9BZP6 476 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 RANGRFQ9HD47 186 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 TECRQ9NZ01 308 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 VSIG4Q9Y279 399 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 TMED3Q9Y3Q3 217 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 ROS1P08922 2347 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 FAT2Q9NYQ8 4349 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 A0A0B4J293 547 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 LOC100506127A0A0U1RQW1 187 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 C15orf61A6NNL5 157 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 CENPXA8MT69 81 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 MPPED1O15442 326 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 PITX3O75364 302 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 NDUFB6O95139 128 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 IGHV4-59P01825 116 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 HSPB1P04792 205 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 LGALS1P09382 135 aaKnown RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 OR8U8P0C7N1 319 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 EGR2P11161 476 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 SLC2A2P11168 524 aaPredicted RBP2.21□□□□□ -2.06
MCF2-208ENST00000519895 SLC25A4P12235 298 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 ZP3P21754 424 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 VDAC1P21796 283 aa2.21□□□□□ -2.06
MCF2-208ENST00000519895 BMI1P35226 326 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms