RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 SURF2Q15527 256 aaPredicted RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PRSS8Q16651 343 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TRIM16LQ309B1 348 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SP6Q3SY56 376 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF562Q6V9R5 426 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMED4Q7Z7H5 227 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF329Q86UD4 541 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 STPG2Q8N412 459 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TCTEX1D1Q8N7M0 179 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TEX45Q8NA69 505 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM116Q8NCL8 245 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ADAD2Q8NCV1 583 aaKnown RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VSTM2AQ8TAG5 236 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CHPT1Q8WUD6 406 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DEDD2Q8WXF8 326 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MRGPRFQ96AM1 343 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HSPB9Q9BQS6 159 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC25A21Q9BQT8 299 aaPredicted RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C7orf50Q9BRJ6 194 aaKnown RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RTBDNQ9BSG5 229 aaPredicted RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FAM103A1Q9BTL3 118 aaKnown RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CCDC32Q9BV29 185 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 GON7Q9BXV9 100 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR51J1Q9H342 316 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC2A8Q9NY64 477 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VSIG4Q9Y279 399 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KCNIP3Q9Y2W7 256 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TRAV41A0A0B4J266 112 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TCRBV4S1A1TA0A5B7 111 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MSGN1A6NI15 193 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 G3V318 75 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ATP6V0E1O15342 81 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PLA2G10O15496 165 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LYRM1O43325 122 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CREBL2O60519 120 aaPredicted RBP4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SNAPC5O75971 98 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR5AC1P0C628 307 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SAA1P0DJI8 122 aaPredicted RBP4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CD28P10747 220 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ANXA3P12429 323 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VDAC1P21796 283 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 G6PCP35575 357 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KRTAP10-3P60369 221 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TNXAQ16473 311 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ECSCRQ19T08 205 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF585BQ52M93 769 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HIST2H2BDQ6DRA6 164 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR4A47Q6IF82 309 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 UNQ5815/PRO19632Q6UWF5 114 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C10orf99Q6UWK7 81 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF695Q8IW36 515 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MMD2Q8IY49 270 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LFNGQ8NES3 379 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RNASE11Q8TAA1 199 aaKnown RBP4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 GRPEL2Q8TAA5 225 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ARPC1AQ92747 370 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DAZAP1Q96EP5 407 aaKnown RBP4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TP53RKQ96S44 253 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PHB2Q99623 299 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NAA60Q9H7X0 242 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF430Q9H8G1 570 aaPredicted RBP4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF355PQ9NSJ1 428 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 COL6A5A8TX70 2615 aa4.55□□□□□ -1.68
SCARNA6.1-201ENST00000516989 STAB1Q9NY15 2570 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TRAV3A0A0B4J244 114 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FAM240BA0A1B0GVZ2 78 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 A0A1W2PN81 502 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 H0Y980 276 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 UPK2O00526 184 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ARPC1BO15143 372 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 UPK1BO75841 260 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ATG12O94817 140 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KBTBD11O94819 623 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NDUFB6O95139 128 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGF1P05019 195 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 APELAP0DMC3 54 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MYOD1P15172 320 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HOXA5P20719 270 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CHRNA7P36544 502 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RPL8P62917 257 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NDPQ00604 133 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DHODHQ02127 395 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 POU2AF1Q16633 256 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TEX38Q6PEX7 206 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 H2BFWTQ7Z2G1 175 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SELENOHQ8IZQ5 122 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PUSL1Q8N0Z8 303 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR5T1Q8NG75 326 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR4A16Q8NH70 328 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR4A5Q8NH83 315 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SGMS2Q8NHU3 365 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM167AQ8TBQ9 72 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CASTOR1Q8WTX7 329 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms