RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 IGHV3-74A0A0B4J1X5 117 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 CHEK1O14757 476 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 CTXN2P0C2S0 81 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 RBMY1A1P0DJD3 496 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 RBMY1CP0DJD4 496 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 DTYMKP23919 212 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 CMC4P56277 68 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 FABP5Q01469 135 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 RBMY1FQ15415 496 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 ZNF66Q6ZN08 573 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 SPAG16Q8N0X2 631 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 Q8NAQ8 132 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 COMMD5Q9GZQ3 224 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 C21orf62Q9NYP8 219 aa14.77□□□□□ -0.05
SQSTM1-215ENST00000514093 F8W735 103 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 UPK2O00526 184 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 MRPS14O60783 128 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 OR13C7P0DN81 318 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 SSX1Q16384 188 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 CDNFQ49AH0 187 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 SPSB3Q6PJ21 355 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 GDPD1Q8N9F7 314 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 TMEM116Q8NCL8 245 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 SCARB1Q8WTV0 552 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 CCL28Q9NRJ3 127 aa14.76□□□□□ -0.05
SQSTM1-215ENST00000514093 IGHV4-28A0A0C4DH34 117 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 IGHV7-4-1A0A0J9YVY3 117 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 C15orf62A8K5M9 175 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 RAB6AP20340 208 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 WT1-ASQ06250 92 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 Q56UQ5 140 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 LEMD1Q68G75 181 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 NR2C2APQ86WQ0 139 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 ZNF575Q86XF7 245 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 PACRGLQ8N7B6 248 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 ZNF414Q96IQ9 312 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 QTRT1Q9BXR0 403 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 ATG5Q9H1Y0 275 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 HRH4Q9H3N8 390 aa14.75□□□□□ -0.05
SQSTM1-215ENST00000514093 TRAV10A0A0B4J240 114 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 METTL21EPA6NDL7 271 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 CYB5BO43169 146 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 SERPINE2P07093 398 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 RANBP1P43487 201 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 TRAM1Q15629 374 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 CNIH2Q6PI25 160 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 NUDCD2Q8WVJ2 157 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 SECTM1Q8WVN6 248 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 HSPG2P98160 4391 aa14.74□□□□□ -0.05
SQSTM1-215ENST00000514093 C15orf61A6NNL5 157 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 SULT1C2O00338 296 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 YIF1AO95070 293 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 PVRIGQ6DKI7 326 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 POM121L12Q8N7R1 296 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 SRSF8Q9BRL6 282 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 AIFM2Q9BRQ8 373 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 TMEM140Q9NV12 185 aa14.73□□□□□ -0.05
SQSTM1-215ENST00000514093 TEX50A0A1B0GTY4 177 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 IFITM5A6NNB3 132 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 CTSGP08311 255 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 TRAPPC2P0DI81 140 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 TRAPPC2BP0DI82 140 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 PTHLHP12272 177 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 TAS2R31P59538 309 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 DEFB131AP59861 70 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 HACD4Q5VWC8 232 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 FAM90A2PQ658T7 463 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 ZNF773Q6PK81 442 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 ZNF767PQ75MW2 155 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 GIMAP1Q8WWP7 306 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 CMTM3Q96MX0 182 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 HINT2Q9BX68 163 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 PLA2G2EQ9NZK7 142 aa14.72□□□□□ -0.05
SQSTM1-215ENST00000514093 ELOA3CA0A087WX78 387 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 K7EIM0 57 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 NQO2P16083 231 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 PSMA1P25786 263 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 DCSTAMPQ9H295 470 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 C8orf4Q9NR00 106 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 ANXA10Q9UJ72 324 aa14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 F11RQ9Y624 299 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-215ENST00000514093 TMEM235A6NFC5 223 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 ERICH4A6NGS2 130 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 NUPL2O15504 423 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 HPRT1P00492 218 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 GIG44P09565 113 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 POU2AF1Q16633 256 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 TCF24Q7RTU0 167 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 FAM24BQ8N5W8 94 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 RNF126Q9BV68 326 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 SCRT1Q9BWW7 348 aa14.7□□□□□ -0.06
SQSTM1-215ENST00000514093 TRAV14DV4A0A0A6YYC5 116 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 PDCD5O14737 125 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 RBFOX2O43251 390 aaKnown RBP eCLIP14.69□□□□□ -0.061e-7■□□□□ 10.9
SQSTM1-215ENST00000514093 SSX5O60225 188 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 FCGR2CP31995 323 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 PAFAH1B2P68402 229 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 ARL6IP1Q15041 203 aa14.69□□□□□ -0.06
SQSTM1-215ENST00000514093 CENPSQ8N2Z9 138 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms