RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TFF3Q07654 80 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 SMAGPQ0VAQ4 97 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 C2orf83Q53S99 150 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 H3BVH4 76 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 LOC105371242A0A075B767 164 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 GOLT1AQ6ZVE7 132 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 PAQR4Q8N4S7 273 aaPredicted RBP13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 LINC01560Q8TB33 94 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 SYT8Q8NBV8 401 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 OR13A1Q8NGR1 328 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 THADAQ6YHU6 1953 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 IQCF6A8MYZ5 107 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 PDLIM4P50479 330 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 FAM90A1Q86YD7 464 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 NPIPB11E5RHQ5 1161 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 H0YIZ8 118 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 PF4V1P10720 104 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 PSG7Q13046 419 aa13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 GTF3AQ92664 365 aaKnown RBP13.61□□□□□ -0.23
HMGXB3-202ENST00000503427 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 HOXA5P20719 270 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 CX3CL1P78423 397 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 ACACAQ13085 2346 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 H3BTX0 84 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 ARF6P62330 175 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 ERASQ7Z444 233 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 CGAP01215 116 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 ATP5J2P56134 94 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 WBP1Q96G27 269 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 PMCHL2Q9BQD1 86 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 SAPCD1Q5SSQ6 148 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 LYZL4Q96KX0 146 aa13.6□□□□□ -0.23
HMGXB3-202ENST00000503427 DPRXA6NFQ7 191 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 FOXH1O75593 365 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 NUDT3O95989 172 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 MOSP00540 346 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 IGFBP2P18065 325 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 FBLL1A6NHQ2 334 aaKnown RBP13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 IGHV3-48P01763 117 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 GSN-AS1Q9NRJ2 163 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 PHLDA3Q9Y5J5 127 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 CGB1A6NKQ9 187 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 RAB37Q96AX2 223 aa13.59□□□□□ -0.23
HMGXB3-202ENST00000503427 ARTNQ5T4W7 220 aa13.58□□□□□ -0.23
HMGXB3-202ENST00000503427 PEAR1Q5VY43 1037 aaPredicted RBP13.58□□□□□ -0.23
HMGXB3-202ENST00000503427 WDR81Q562E7 1941 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 IL4P05112 153 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 RELQ04864 619 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 PNKDQ8N490 385 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 NEU4Q8WWR8 484 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 GCSHP23434 173 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 MST1P26927 711 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 C21orf62-AS1Q17RA5 79 aa13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 PARD6GQ9BYG4 376 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-202ENST00000503427 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 BSPH1Q075Z2 132 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 FAM53AQ6NSI3 398 aaPredicted RBP13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 IGKV1D-13A0A0B4J2D9 117 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 NPIPB6E9PJ23 425 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 IGKV1-13P0DP09 117 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 ATP5G3P48201 142 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 ICAM4Q14773 271 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 DNLZQ5SXM8 178 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 MESP1Q9BRJ9 268 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 SLC17A3O00476 420 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 PLPPR1Q8TBJ4 325 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 ZNF319Q9P2F9 582 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 PLP1P60201 277 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 ID3Q02535 119 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 TBR1Q16650 682 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 ATOH7Q8N100 152 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 HEATR5BQ9P2D3 2071 aa13.57□□□□□ -0.24
HMGXB3-202ENST00000503427 A0A1B0GV90 55 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 ZNF324O75467 553 aaPredicted RBP13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 RPL23P62829 140 aaKnown RBP13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 SRSF3P84103 164 aaKnown RBP13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 PEX7O00628 323 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 COX6CP09669 75 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 TFPI2P48307 235 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 MEF2CQ06413 473 aaPredicted RBP13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 LRTM2Q8N967 370 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 HIST1H4GQ99525 98 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 A0A0A6YYD4 124 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 PINLYPA6NC86 204 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 NPPCP23582 126 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 ATP5G2Q06055 141 aa13.56□□□□□ -0.24
HMGXB3-202ENST00000503427 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms