RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RPRMLQ8N4K4 120 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM105Q8N8V8 129 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 DAND5Q8N907 189 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 ST20-AS1Q8NBB2 130 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 APCDD1LQ8NCL9 501 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 BPIFB6Q8NFQ5 453 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR9Q1Q8NGQ5 310 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR13C4Q8NGS5 318 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 FNDC9Q8TBE3 224 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 CD200R1Q8TD46 325 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 LMX1AQ8TE12 382 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 MBD3L1Q8WWY6 194 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 PLEKHB2Q96CS7 222 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 MGLLQ99685 303 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 HSPB9Q9BQS6 159 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 EFCAB11Q9BUY7 163 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 FAM107BQ9H098 131 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 EFCAB1Q9HAE3 211 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 MED29Q9NX70 200 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 ICOSQ9Y6W8 199 aa1.35□□□□□ -2.19
HMGB1P35-201ENST00000503360 BAZ2AQ9UIF9 1905 aaKnown RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A087WUU8 490 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAV38-1A0A0B4J264 116 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAV4A0A0B4J268 109 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 DUXBA0A1W2PPF3 345 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 GRIFINA4D1Z8 144 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 H3BMM0 161 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 I3L521 148 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 K7EM74 188 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ARPC5O15511 151 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 FAM107AO95990 144 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGKV1D-33P01593 117 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGKV1-33P01594 117 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 PRM2P04554 102 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 SLC25A16P16260 332 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF14P17017 642 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 CASP1P29466 404 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 BLVRBP30043 206 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 RPL27AP46776 148 aaKnown RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 CSN1S1P47710 185 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ATP5G3P48201 142 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 PSMD8P48556 350 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 SRP9P49458 86 aaKnown RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 EMP1P54849 157 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 FXYD7P58549 80 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 RPS28P62857 69 aaKnown RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 AKR1C1Q04828 323 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF616Q08AN1 781 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 RASL11AQ6T310 242 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF322Q6U7Q0 402 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 C16orf47Q6ZP98 133 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR5J2Q8NH18 312 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 UBE2WQ96B02 151 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 RMND5BQ96G75 393 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGF2BP2-AS1Q96M15 143 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ERMAPQ96PL5 475 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 MND1Q9BWT6 205 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 C11orf68Q9H3H3 251 aaKnown RBP1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 C11orf1Q9H5F2 150 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 RNF122Q9H9V4 155 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 XAGE1AQ9HD64 81 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM138Q9NPI0 162 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 MED11Q9P086 117 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 GSKIPQ9P0R6 139 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR5V1Q9UGF6 321 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 SNX12Q9UMY4 172 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 CYSLTR1Q9Y271 337 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 LINC00588Q9Y4M8 146 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 S4R3C0 116 aa1.34□□□□□ -2.19
HMGB1P35-201ENST00000503360 ARHGEF10O15013 1369 aa1.34□□□□□ -2.2
HMGB1P35-201ENST00000503360 NID2Q14112 1375 aa1.34□□□□□ -2.2
HMGB1P35-201ENST00000503360 ITGB4P16144 1822 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 TUBGCP6Q96RT7 1819 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 NUP160Q12769 1436 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 FMN1Q68DA7 1419 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SETD5Q9C0A6 1442 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LOXHD1Q8IVV2 1947 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 BORCS7-ASMTA0A0B4J1R7 106 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A0B4J2C4 111 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 C17orf51A8MQB3 221 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 A8MUU9 505 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 A8MWP6 167 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 CLDN25C9JDP6 229 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LECT2O14960 151 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV1-69P01742 117 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV3-53P01767 116 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 INAFM2P0DMQ5 153 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 OGNP20774 298 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BOP23527 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 CRYBB3P26998 211 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BBP33778 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 LPAR6P43657 344 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 RBM11P57052 281 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 PIGPP57054 158 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BDP58876 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 TAS2R30P59541 319 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H4AP62805 103 aaKnown RBP1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HIST1H2BCP62807 126 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 HTR4Q13639 388 aa1.33□□□□□ -2.2
HMGB1P35-201ENST00000503360 SPCS2Q15005 226 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms