RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 MC5RP33032 325 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 DUTP33316 252 aaKnown RBP3.96□□□□□ -1.78
FXN-205ENST00000498653 MYCNOSP40205 109 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 KIR2DS2P43631 304 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 REG1BP48304 166 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 PIGPP57054 158 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 UBE2MP61081 183 aaKnown RBP3.96□□□□□ -1.78
FXN-205ENST00000498653 CBX3Q13185 183 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 DIAPH2-AS1Q14236 149 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 SSX2Q16385 188 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 TRIM16LQ309B1 348 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 Q6ZSN1 163 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 KCTD9Q7L273 389 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 TBC1D26Q86UD7 250 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 SLC25A42Q86VD7 318 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 SGPP2Q8IWX5 399 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 DYNAPQ8N1N2 210 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 TCTEX1D1Q8N7M0 179 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 MINDY2Q8NBR6 621 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 ADAD2Q8NCV1 583 aaKnown RBP3.96□□□□□ -1.78
FXN-205ENST00000498653 OR51H1Q8NH63 302 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 TCTEX1D2Q8WW35 142 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 C5orf30Q96GV9 206 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 DUX3Q96PT4 197 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 ZNF251Q9BRH9 671 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 RTBDNQ9BSG5 229 aaPredicted RBP3.96□□□□□ -1.78
FXN-205ENST00000498653 MRPL20Q9BYC9 149 aaKnown RBP3.96□□□□□ -1.78
FXN-205ENST00000498653 C20orf85Q9H1P6 137 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 C5orf66Q9H5L9 145 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 RAB18Q9NP72 206 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 SLC2A9Q9NRM0 540 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 SLC35D1Q9NTN3 355 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 NUDT15Q9NV35 164 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 FLVCR2Q9UPI3 526 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 KCNIP3Q9Y2W7 256 aa3.96□□□□□ -1.78
FXN-205ENST00000498653 IGHV3-72A0A0B4J1Y9 119 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 C3orf85A0A1B0GTC6 90 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 A0A1W2PPI3 338 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CRYM-AS1A6NIL9 109 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 INMT-MINDY4F8WBC2 141 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 H7C2Y5 167 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 PRAF2O60831 178 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 FCGR3BO75015 233 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 PROP1O75360 226 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 PEX14O75381 377 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 B3GALNT1O75752 331 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 DHFRP00374 187 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 IGLV2-14P01704 120 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 IGF1P05019 195 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 SERPINE2P07093 398 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 SNRNP70P08621 437 aaKnown RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 CT45A6P0DMU7 189 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CT45A5P0DMU8 189 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CT45A7P0DMV0 189 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 ANXA3P12429 323 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 GP9P14770 177 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 ANXA7P20073 488 aaKnown RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 F2RP25116 425 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CD1BP29016 333 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 RAB13P51153 203 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 RAB25P57735 213 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 RPL30P62888 115 aaKnown RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 DHODHQ02127 395 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 EIF4EBP1Q13541 118 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 RTL8BQ17RB0 113 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 C4orf46Q504U0 113 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 TMEM128Q5BJH2 165 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 OR2B11Q5JQS5 317 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 LDLRAD2Q5SZI1 272 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 GLDNQ6ZMI3 551 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 PDPNQ86YL7 162 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 SPAG16Q8N0X2 631 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 ZNF383Q8NA42 475 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 DRAXINQ8NBI3 349 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 OR4S2Q8NH73 311 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CD300LFQ8TDQ1 290 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 C17orf50Q8WW18 174 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 CAPSLQ8WWF8 208 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 TMEM230Q96A57 120 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 MARVELD1Q9BSK0 173 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 ALX4Q9H161 411 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 NAA60Q9H7X0 242 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 GPN1Q9HCN4 374 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 FAM212BQ9NTI7 297 aaPredicted RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 LIN7CQ9NUP9 197 aaKnown RBP3.95□□□□□ -1.78
FXN-205ENST00000498653 WASHC3Q9Y3C0 194 aa3.95□□□□□ -1.78
FXN-205ENST00000498653 PIGBOS1A0A0B4J2F0 54 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 C9orf170A2RU37 121 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 LINC00473A8K010 186 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 VGLL3A8MV65 326 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 H0Y980 276 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 H0YJW9 148 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
FXN-205ENST00000498653 ATG12O94817 140 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 SFT2D2O95562 160 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 CRYZL1O95825 349 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 MOSP00540 346 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 HRASP01112 189 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 IGKV1D-33P01593 117 aa3.94□□□□□ -1.78
FXN-205ENST00000498653 IGKV1-33P01594 117 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms