RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.47
CHTOP-206ENST00000495554 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 KBTBD11O94819 623 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 APOBEC3AP31941 199 aaPredicted RBP12.14□□□□□ -0.47
CHTOP-206ENST00000495554 RND2P52198 227 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 TMEM241Q24JQ0 296 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
CHTOP-206ENST00000495554 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 FOXA2Q9Y261 457 aaPredicted RBP12.14□□□□□ -0.47
CHTOP-206ENST00000495554 hADV38S2A0JD32 116 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 TSTD3H0UI37 97 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 OR4A8P0C604 315 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 BSPH1Q075Z2 132 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
CHTOP-206ENST00000495554 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
CHTOP-206ENST00000495554 C17orf100A8MU93 164 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 TMPRSS2O15393 492 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 HRASP01112 189 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 OPRK1P41145 380 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
CHTOP-206ENST00000495554 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
CHTOP-206ENST00000495554 RAB1CQ92928 201 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 DYSFO75923 2080 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 IGF2RP11717 2491 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 HCFC1P51610 2035 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 DSCAML1Q8TD84 2053 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 NKX6-3A6NJ46 265 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 POU2AF1Q16633 256 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 CDPF1Q6NVV7 123 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 PRSS57Q6UWY2 283 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 SLC25A48Q6ZT89 311 aaKnown RBP12.13□□□□□ -0.47
CHTOP-206ENST00000495554 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
CHTOP-206ENST00000495554 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 LINC00312Q9Y6C7 94 aa12.13□□□□□ -0.47
CHTOP-206ENST00000495554 KALRNO60229 2985 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 S100A7AQ86SG5 101 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 GATAD1Q8WUU5 269 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 RPUSD4Q96CM3 377 aaKnown RBP12.12□□□□□ -0.47
CHTOP-206ENST00000495554 NUDT11Q96G61 164 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 POLEQ07864 2286 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 TRAV38-1A0A0B4J264 116 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 PAGE4O60829 102 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 MMP23AO75900 390 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 DEFA4P12838 97 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 ZCCHC14Q8WYQ9 949 aaKnown RBP12.12□□□□□ -0.47
CHTOP-206ENST00000495554 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 PARLQ9H300 379 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
CHTOP-206ENST00000495554 S100A7P31151 101 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 ADIRFQ15847 76 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 EREGO14944 169 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
CHTOP-206ENST00000495554 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
CHTOP-206ENST00000495554 BSXQ3C1V8 233 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 NEIL1Q96FI4 390 aaPredicted RBP12.11□□□□□ -0.47
CHTOP-206ENST00000495554 MGST2Q99735 147 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 KCNIP2Q9NS61 270 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
CHTOP-206ENST00000495554 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 RAXQ9Y2V3 346 aa12.11□□□□□ -0.47
CHTOP-206ENST00000495554 ZZEF1O43149 2961 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 SPTBN4Q9H254 2564 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 TGOLN2O43493 480 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 NPY1RP25929 384 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 RTL8BQ17RB0 113 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 RND1Q92730 232 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
CHTOP-206ENST00000495554 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 YIF1AO95070 293 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 RPL23P62829 140 aaKnown RBP12.1□□□□□ -0.47
CHTOP-206ENST00000495554 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
CHTOP-206ENST00000495554 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
CHTOP-206ENST00000495554 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
CHTOP-206ENST00000495554 RPL31P62899 125 aaKnown RBP12.09□□□□□ -0.47
CHTOP-206ENST00000495554 BEND2Q8NDZ0 799 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms