RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 UNQ9165/PRO28630Q6UXU0 137 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 TBC1D26Q86UD7 250 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 OR4D10Q8NGI6 311 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 CD300LFQ8TDQ1 290 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 WDR89Q96FK6 387 aaPredicted RBP8.02□□□□□ -1.13
NELFE-213ENST00000494956 CMTM3Q96MX0 182 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 ABHD1Q96SE0 405 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 QTRT1Q9BXR0 403 aaKnown RBP8.02□□□□□ -1.13
NELFE-213ENST00000494956 PLEKHA3Q9HB20 300 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 SCPEP1Q9HB40 452 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 SIGLEC8Q9NYZ4 499 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 COMMD9Q9P000 198 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 PEMTQ9UBM1 199 aa8.02□□□□□ -1.13
NELFE-213ENST00000494956 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 ZNF320A2RRD8 509 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 CD3DP04234 171 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 TRAPPC2P0DI81 140 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 TRAPPC2BP0DI82 140 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 HIST1H1BP16401 226 aaKnown RBP8.01□□□□□ -1.13
NELFE-213ENST00000494956 ZNF182P17025 639 aaPredicted RBP8.01□□□□□ -1.13
NELFE-213ENST00000494956 KLK9Q2XQG4 91 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 DEFB114Q30KQ6 69 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 TM4SF20Q53R12 229 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 SLC25A24Q6NUK1 477 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 MZT2AQ6P582 158 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 SGPP2Q8IWX5 399 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 CMTM1Q8IZ96 169 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 Q8N402 240 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 ZNF502Q8TBZ5 544 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 DYNLRB2Q8TF09 96 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 AIFM2Q9BRQ8 373 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 MRPS26Q9BYN8 205 aaKnown RBP8.01□□□□□ -1.13
NELFE-213ENST00000494956 RETNQ9HD89 108 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 NDUFA4L2Q9NRX3 87 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 MLXQ9UH92 298 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 KLK9Q9UKQ9 250 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 OR51B2Q9Y5P1 312 aa8.01□□□□□ -1.13
NELFE-213ENST00000494956 IGHV3OR16-8A0A075B7F1 116 aa8□□□□□ -1.13
NELFE-213ENST00000494956 DHFRP00374 187 aa8□□□□□ -1.13
NELFE-213ENST00000494956 SERPINE2P07093 398 aa8□□□□□ -1.13
NELFE-213ENST00000494956 PGAM2P15259 253 aa8□□□□□ -1.13
NELFE-213ENST00000494956 PPP5CP53041 499 aa8□□□□□ -1.13
NELFE-213ENST00000494956 CD81P60033 236 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GUCA2BQ16661 112 aa8□□□□□ -1.13
NELFE-213ENST00000494956 HAGHQ16775 308 aa8□□□□□ -1.13
NELFE-213ENST00000494956 SPINK9Q5DT21 86 aa8□□□□□ -1.13
NELFE-213ENST00000494956 FAAP20Q6NZ36 180 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GPR141Q7Z602 305 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GTSCR1Q86UQ5 136 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GPHB5Q86YW7 130 aa8□□□□□ -1.13
NELFE-213ENST00000494956 CLVS1Q8IUQ0 354 aaPredicted RBP8□□□□□ -1.13
NELFE-213ENST00000494956 LAX1Q8IWV1 398 aa8□□□□□ -1.13
NELFE-213ENST00000494956 DEFB125Q8N687 156 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GDPD1Q8N9F7 314 aa8□□□□□ -1.13
NELFE-213ENST00000494956 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
NELFE-213ENST00000494956 BORCS5Q969J3 196 aa8□□□□□ -1.13
NELFE-213ENST00000494956 MRGPRFQ96AM1 343 aa8□□□□□ -1.13
NELFE-213ENST00000494956 SEC22AQ96IW7 307 aa8□□□□□ -1.13
NELFE-213ENST00000494956 TM2D3Q9BRN9 247 aa8□□□□□ -1.13
NELFE-213ENST00000494956 GAR1Q9NY12 217 aaKnown RBP8□□□□□ -1.13
NELFE-213ENST00000494956 TRBV7-1A0A0A6YYK4 115 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 OR2T8A6NH00 312 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 A8MZ25 164 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 LGALS9O00182 355 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 RGS5O15539 181 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 SNAPC5O75971 98 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 SCAF4O95104 1147 aaKnown RBP7.99□□□□□ -1.13
NELFE-213ENST00000494956 IGHV3-48P01763 117 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 CBLN1P23435 193 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 RNASE10Q5GAN6 216 aaKnown RBP7.99□□□□□ -1.13
NELFE-213ENST00000494956 FAM209BQ5JX69 171 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 SLC38A6Q8IZM9 456 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 TMEM61Q8N0U2 210 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 UXS1Q8NBZ7 420 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 TP53RKQ96S44 253 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 NEURL2Q9BR09 285 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 TUBA4BQ9H853 241 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 ZMAT4Q9H898 229 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 MTFP1Q9UDX5 166 aa7.99□□□□□ -1.13
NELFE-213ENST00000494956 C15orf61A6NNL5 157 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 F8W735 103 aaPredicted RBP7.98□□□□□ -1.13
NELFE-213ENST00000494956 TGOLN2O43493 480 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 PTBP1P26599 531 aaKnown RBP eCLIP7.98□□□□□ -1.13
NELFE-213ENST00000494956 UCP3P55916 312 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 PIGPP57054 158 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 SP6Q3SY56 376 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 SCGB2B2Q4G0G5 96 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 LPCAT3Q6P1A2 487 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 PLET1Q6UQ28 207 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 BTNL8Q6UX41 500 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 H2BFWTQ7Z2G1 175 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 LHFPL1Q86WI0 220 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 SCARB1Q8WTV0 552 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 AP3S1Q92572 193 aa7.98□□□□□ -1.13
NELFE-213ENST00000494956 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
NELFE-213ENST00000494956 ZNF414Q96IQ9 312 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms