RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 NEDD8Q15843 81 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 TIMM50Q3ZCQ8 353 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 CLVS1Q8IUQ0 354 aaPredicted RBP8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 SPARTQ8N0X7 666 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 ZBTB34Q8NCN2 500 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 FCGR1BQ92637 280 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 COMMD5Q9GZQ3 224 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 CCDC90BQ9GZT6 254 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 DUSP21Q9H596 190 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 SPATA2Q9UM82 520 aa8.11□□□□□ -1.11
SNRNP200-207ENST00000493271 IGLC7A0M8Q6 106 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 C15orf62A8K5M9 175 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 J3QRK9 145 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 REG1AP05451 166 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 RPL35AP18077 110 aaKnown RBP8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 OR2B8PP59922 312 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 PLA2G7Q13093 441 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 CATR1Q13166 79 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 POU2AF1Q16633 256 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 HACD4Q5VWC8 232 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 PRSS48Q7RTY5 328 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 GDPD1Q8N9F7 314 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 OR13F1Q8NGS4 319 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 CD300LFQ8TDQ1 290 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 BCL7BQ9BQE9 202 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 HRASLSQ9HDD0 168 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 TAS2R8Q9NYW2 309 aa8.1□□□□□ -1.11
SNRNP200-207ENST00000493271 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 IGKV1D-13A0A0B4J2D9 117 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 CGB1A6NKQ9 187 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 HPRT1P00492 218 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 CD5P06127 495 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 IGKV1-13P0DP09 117 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 NQO2P16083 231 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 MYL9P24844 172 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 TMBIM6P55061 237 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 ARPC4P59998 168 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 SSX9Q7RTT3 188 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 SPAG16Q8N0X2 631 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 OR5B3Q8NH48 314 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 RAB2BQ8WUD1 216 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 BORCS5Q969J3 196 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 MGLLQ99685 303 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 QTRT1Q9BXR0 403 aaKnown RBP8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 ATG5Q9H1Y0 275 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 HRH4Q9H3N8 390 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 ANXA10Q9UJ72 324 aa8.09□□□□□ -1.11
SNRNP200-207ENST00000493271 IGHV3-35A0A0C4DH35 117 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 UPK2O00526 184 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 SERPINE2P07093 398 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 CTSDP07339 412 aaPredicted RBP8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 RAB3BP20337 219 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 GNG2P59768 71 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 RELQ04864 619 aaPredicted RBP8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 TBCEQ15813 527 aaPredicted RBP8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 OR11H2Q8NH07 326 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 CMTM3Q96MX0 182 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 PLEKHA2Q9HB19 425 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 C21orf62Q9NYP8 219 aa8.08□□□□□ -1.12
SNRNP200-207ENST00000493271 OR2T8A6NH00 312 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAPPC2P0DI81 140 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 TRAPPC2BP0DI82 140 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 PAFAH1B2P68402 229 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 TMEM41BQ5BJD5 291 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 GPR107Q5VW38 600 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 NR2C2APQ86WQ0 139 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 CADM3Q8N126 398 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 GVQW1Q8N7I0 195 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 COMMD9Q9P000 198 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 SMPXQ9UHP9 88 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 ETV7Q9Y603 341 aa8.07□□□□□ -1.12
SNRNP200-207ENST00000493271 H3BMQ9 156 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 DFFBO76075 338 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 S1PR2O95136 353 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 RPA2P15927 270 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PSMB9P28065 219 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 MFAP2P55001 183 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 OR10A3P58181 314 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PRR20EP86478 221 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PRR20CP86479 221 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PRR20DP86480 221 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PRR20BP86481 221 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 PRR20AP86496 221 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 TMEM187Q14656 261 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 UBE2UQ5VVX9 321 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 SLC25A24Q6NUK1 477 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 APRG1Q8IVJ8 170 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 CENPSQ8N2Z9 138 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 DMBX1Q8NFW5 382 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 OR1L8Q8NGR8 309 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 SCARB1Q8WTV0 552 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 SECTM1Q8WVN6 248 aa8.06□□□□□ -1.12
SNRNP200-207ENST00000493271 LSM10Q969L4 123 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms