RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ADAMTSL5Q6ZMM2 481 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 CADM3Q8N126 398 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 ARRDC1Q8N5I2 433 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 TMEM229BQ8NBD8 167 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 OR1L8Q8NGR8 309 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 DIRAS2Q96HU8 199 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 SEC22AQ96IW7 307 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 ASCL2Q99929 193 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 HINT2Q9BX68 163 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 SIGLEC8Q9NYZ4 499 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 OR51B2Q9Y5P1 312 aa9.81□□□□□ -0.84
HDAC1-209ENST00000484305 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
HDAC1-209ENST00000484305 SNAPC5O75971 98 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 RAB3DO95716 219 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 SERPINE2P07093 398 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 PGAM2P15259 253 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC1-209ENST00000484305 ARL3P36405 182 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 PPP5CP53041 499 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 TAS2R19P59542 299 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 Q8N1Y9 231 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 TERB2Q8NHR7 220 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 EEF1AKMT3Q96AZ1 226 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 ISOC1Q96CN7 298 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 PEMTQ9UBM1 199 aa9.8□□□□□ -0.84
HDAC1-209ENST00000484305 IZUMO1RA6ND01 250 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 CLEC3BP05452 202 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 NHLRC4P0CG21 123 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 EDN2P20800 178 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 MFAP2P55001 183 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 PIGPP57054 158 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 RND3P61587 244 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 MRPS10P82664 201 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 SSBP1Q04837 148 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 IL18Q14116 193 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 THOC7Q6I9Y2 204 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 FAAP20Q6NZ36 180 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 STEAP1BQ6NZ63 245 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 H2BFWTQ7Z2G1 175 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 HSD17B13Q7Z5P4 300 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 GDPD1Q8N9F7 314 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 SMIM4Q8WVI0 70 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 MRGPRFQ96AM1 343 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 ZNF486Q96H40 463 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 CXorf58Q96LI9 332 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 SLIRPQ9GZT3 109 aaKnown RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 C6orf62Q9GZU0 229 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-209ENST00000484305 ZC4H2Q9NQZ6 224 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 TMEM14BQ9NUH8 114 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 PRNDQ9UKY0 176 aa9.79□□□□□ -0.84
HDAC1-209ENST00000484305 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 H0Y980 276 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 CTDSPLO15194 276 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 NOL3O60936 208 aaKnown RBP9.78□□□□□ -0.84
HDAC1-209ENST00000484305 FRMD6-AS1P0C7T7 363 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 SCGB2B2Q4G0G5 96 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 OR5B3Q8NH48 314 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 MARCH1Q8TCQ1 289 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 TSC22D3Q99576 134 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 FKBP11Q9NYL4 201 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 CEPT1Q9Y6K0 416 aa9.78□□□□□ -0.84
HDAC1-209ENST00000484305 C2orf70A6NJV1 201 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 LGALS9O00182 355 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 GPR183P32249 361 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 TNFSF8P32971 234 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 IZUMO4Q1ZYL8 232 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-209ENST00000484305 LCN12Q6JVE5 192 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 Q8N402 240 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 OR4A16Q8NH70 328 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 ZFAND1Q8TCF1 268 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 TMEM56Q96MV1 263 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 THAP7Q9BT49 309 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-209ENST00000484305 THYN1Q9P016 225 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 F11RQ9Y624 299 aaKnown RBP9.77□□□□□ -0.85
HDAC1-209ENST00000484305 U3KQK5 164 aa9.77□□□□□ -0.85
HDAC1-209ENST00000484305 IGHV3-21A0A0B4J1V1 117 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 C3orf85A0A1B0GTC6 90 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 IGKV1-5P01602 117 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 IGHV4-30-4P0DP06 118 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 FOLR2P14207 255 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 MEF2DQ14814 521 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 DEFB114Q30KQ6 69 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 SP6Q3SY56 376 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 OR4C16Q8NGL9 310 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 MCFD2Q8NI22 146 aa9.76□□□□□ -0.85
HDAC1-209ENST00000484305 VN1R17PQ8TDU5 208 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms