RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LGI3Q8N145 548 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 LFNGQ8NES3 379 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 DMBX1Q8NFW5 382 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 TMEM230Q96A57 120 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 RRNAD1Q96FB5 475 aaKnown RBP3.96□□□□□ -1.78
HDAC6-223ENST00000480525 RCC1LQ96I51 464 aaKnown RBP3.96□□□□□ -1.78
HDAC6-223ENST00000480525 TP53RKQ96S44 253 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 TXN2Q99757 166 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 CITED2Q99967 270 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-223ENST00000480525 PARP11Q9NR21 331 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 TPSG1Q9NRR2 321 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-223ENST00000480525 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 FBXO7Q9Y3I1 522 aa3.96□□□□□ -1.78
HDAC6-223ENST00000480525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 TCRBV4S1A1TA0A5B7 111 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 MSGN1A6NI15 193 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 CGB1A6NKQ9 187 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 LINC01548A6NM66 108 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 LGALS9O00182 355 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 TNFSF12O43508 249 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 PITX3O75364 302 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 SFT2D2O95562 160 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 KRASP01116 189 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 IGKV1-5P01602 117 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 HLA-AP01891 365 aaKnown RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 TCRBP04435 133 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 IL5P05113 134 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 OR5AC1P0C628 307 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 CD28P10747 220 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 AKR1C2P52895 323 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 RAB25P57735 213 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 DEFA1P59665 94 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 DEFA3P59666 94 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 SPCS3P61009 180 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 EGFEM1PQ0D2K5 195 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 PJVKQ0ZLH3 352 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 DCTN2Q13561 401 aaKnown RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 EXOSC2Q13868 293 aaKnown RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 TNXAQ16473 311 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 TMEM95Q3KNT9 176 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 PHLDA2Q53GA4 152 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 C9orf152Q5JTZ5 239 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF57Q68EA5 555 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 SPSB3Q6PJ21 355 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 REC114Q7Z4M0 266 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 OR2C3Q8N628 320 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 OR4A16Q8NH70 328 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 MITD1Q8WV92 249 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 NOL4LQ96MY1 436 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 CIB3Q96Q77 187 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 MARVELD1Q9BSK0 173 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 HSPB7Q9UBY9 170 aa3.95□□□□□ -1.78
HDAC6-223ENST00000480525 F11RQ9Y624 299 aaKnown RBP3.95□□□□□ -1.78
HDAC6-223ENST00000480525 A0A0B4J293 547 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 TEX50A0A1B0GTY4 177 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 A0A1B0GW64 132 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 C9orf170A2RU37 121 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SNRPGP15A8MWD9 76 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 A8MWP6 167 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 FNDC10F2Z333 226 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 G3V318 75 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 HAX1O00165 279 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SCGB2A1O75556 95 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 MED6O75586 246 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 PTTG1O95997 202 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 TRGV3P03979 118 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 HSPB1P04792 205 aaKnown RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 RPLP1P05386 114 aaKnown RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 OR4E1P0C645 316 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SULT1A3P0DMM9 295 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SULT1A4P0DMN0 295 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 G6PCP35575 357 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 HTR2BP41595 481 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SUB1P53999 127 aaKnown RBP eCLIP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ELLP55199 621 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 TAS2R30P59541 319 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ERHP84090 104 aaKnown RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 WT1-ASQ06250 92 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ZNF616Q08AN1 781 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 DHRS2Q13268 280 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SMCO1Q147U7 214 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ECSCRQ19T08 205 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 TRIM16LQ309B1 348 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 C2orf83Q53S99 150 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SAMD5Q5TGI4 173 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 FAAP20Q6NZ36 180 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ETV3LQ6ZN32 361 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 LYG2Q86SG7 212 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 GPHB5Q86YW7 130 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SELENOHQ8IZQ5 122 aaKnown RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 SLC35G3Q8N808 338 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 OR2K2Q8NGT1 345 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 COQ8AQ8NI60 647 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 GRPEL2Q8TAA5 225 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 LHFPL5Q8TAF8 219 aa3.94□□□□□ -1.78
HDAC6-223ENST00000480525 RNASEH2CQ8TDP1 164 aaKnown RBP3.94□□□□□ -1.78
HDAC6-223ENST00000480525 ABHD5Q8WTS1 349 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms