RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ZNF823P16415 610 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 FUT1P19526 365 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 HTR1DP28221 377 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 GPR183P32249 361 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 PTGER4P35408 488 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR1D4P47884 311 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SPINT3P49223 89 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 LHX2P50458 406 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 FABP6P51161 128 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 DUSP3P51452 185 aaPredicted RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 CX3CL1P78423 397 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SMAGPQ0VAQ4 97 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 VWC2Q2TAL6 325 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 LINC01590Q5TEZ4 76 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 S100A7AQ86SG5 101 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 TMEM256Q8N2U0 113 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 ZNF439Q8NDP4 499 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR4F17Q8NGA8 305 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR5AR1Q8NGP9 310 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR10X1Q8NGY0 326 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR4F5Q8NH21 305 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR4C3Q8NH37 302 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 PFN4Q8NHR9 129 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR51E1Q8TCB6 317 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 C18orf32Q8TCD1 76 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SSMEM1Q8WWF3 244 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 LSM10Q969L4 123 aaKnown RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 ADTRPQ96IZ2 230 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 LINC00615Q96LM1 132 aaPredicted RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 OR4F4Q96R69 305 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 NMNAT3Q96T66 252 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SDF2Q99470 211 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 ANAPC13Q9BS18 74 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SFXN3Q9BWM7 321 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 GGTLC1Q9BX51 225 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 S1PR5Q9H228 398 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 ELOVL3Q9HB03 270 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 TAS2R4Q9NYW5 299 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 TAAR3PQ9P1P4 343 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 TCF19Q9Y242 345 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SOX21Q9Y651 276 aaPredicted RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SPCS1Q9Y6A9 102 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 SMAD5-AS1Q9Y6J3 95 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 GREB1Q4ZG55 1949 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 KIAA1217Q5T5P2 1943 aa3.3□□□□□ -1.88
CMSS1-204ENST00000479555 KIF26AQ9ULI4 1882 aaPredicted RBP3.3□□□□□ -1.88
CMSS1-204ENST00000479555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 A0A0G2JLM5 398 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 C3orf85A0A1B0GTC6 90 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 TEX50A0A1B0GTY4 177 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 A0A1B0GV50 99 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 A0A1B0GWA3 101 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 LOC107986453A0A1B0GWG9 222 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 OR2T8A6NH00 312 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 LRRC30A6NM36 301 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 C11orf94C9JXX5 98 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 F5H5K5 113 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 ISLRO14498 428 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 CRLF1O75462 422 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 FOXH1O75593 365 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 CLDN1O95832 211 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 APOA2P02652 100 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 TTRP02766 147 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 WNT2P09544 360 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 C3orf79P0CE67 100 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 HIST1H1TP22492 207 aaPredicted RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 PEBP1P30086 187 aaKnown RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 DYNLT3P51808 116 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 CCL20P78556 96 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 QRFPP83859 136 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 TGFBR3Q03167 851 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 ZP4Q12836 540 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 KLRD1Q13241 179 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 KLF5Q13887 457 aaPredicted RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 EXOSC7Q15024 291 aaKnown RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 CDKN3Q16667 212 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 MEP1BQ16820 701 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 MPV17L2Q567V2 206 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 TMEM42Q69YG0 159 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 TMEM136Q6ZRR5 245 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 Q6ZSR6 202 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 OLIG3Q7RTU3 272 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 ATP5L2Q7Z4Y8 100 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 PRR22Q8IZ63 422 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 GVQW1Q8N7I0 195 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 LRRC75AQ8NAA5 344 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 OR8B3Q8NGG8 313 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 LMX1AQ8TE12 382 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 PP6455Q8WZ26 134 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 BMFQ96LC9 184 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 OR8B2Q96RD0 313 aa3.29□□□□□ -1.88
CMSS1-204ENST00000479555 FAM103A1Q9BTL3 118 aaKnown RBP3.29□□□□□ -1.88
CMSS1-204ENST00000479555 HINT2Q9BX68 163 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms