RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FGF2P09038 288 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 IGKV1-13P0DP09 117 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 RAB6AP20340 208 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 RPS25P62851 125 aaKnown RBP11.73□□□□□ -0.53
DDX56-210ENST00000479440 HSD17B13Q7Z5P4 300 aaPredicted RBP11.73□□□□□ -0.53
DDX56-210ENST00000479440 Q8NAQ8 132 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 QTRT1Q9BXR0 403 aaKnown RBP11.73□□□□□ -0.53
DDX56-210ENST00000479440 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
DDX56-210ENST00000479440 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 C15orf61A6NNL5 157 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 RTL8CO15255 209 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 AMBPP02760 352 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 P0DMU3 169 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 BRWD1-AS2P59051 145 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 TAS2R31P59538 309 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 RELQ04864 619 aaPredicted RBP11.72□□□□□ -0.53
DDX56-210ENST00000479440 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 Q6ZTC4 211 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 RHPN1-AS1Q9BWJ2 59 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
DDX56-210ENST00000479440 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 CHEK1O14757 476 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDX56-210ENST00000479440 GNAO1P09471 354 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 MIFP14174 115 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 HLA-DMBP28068 263 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 Q56UQ5 140 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 CNIH2Q6PI25 160 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
DDX56-210ENST00000479440 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 UPK2O00526 184 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 PDCD5O14737 125 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 NQO2P16083 231 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 CATR1Q13166 79 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 MSMO1Q15800 293 aa11.7□□□□□ -0.54
DDX56-210ENST00000479440 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 NUPL2O15504 423 aaKnown RBP11.69□□□□□ -0.54
DDX56-210ENST00000479440 TNFSF12O43508 249 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 DFFBO76075 338 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 HPRT1P00492 218 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 CD5P06127 495 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 EIF4EP06730 217 aaKnown RBP11.69□□□□□ -0.54
DDX56-210ENST00000479440 SERPINE2P07093 398 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 OR13C7P0DN81 318 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 POU2AF1Q16633 256 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 STHQ8IWL8 128 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 SCARB1Q8WTV0 552 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
DDX56-210ENST00000479440 GPHA2Q96T91 129 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 TMEM140Q9NV12 185 aa11.69□□□□□ -0.54
DDX56-210ENST00000479440 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
DDX56-210ENST00000479440 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
DDX56-210ENST00000479440 TRAV3A0A0B4J244 114 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
DDX56-210ENST00000479440 YIF1AO95070 293 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 ZBTB34Q8NCN2 500 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 DMBX1Q8NFW5 382 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 SECTM1Q8WVN6 248 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 OR10C1Q96KK4 312 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 CCDC90BQ9GZT6 254 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 ATG5Q9H1Y0 275 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 ACOT13Q9NPJ3 140 aa11.68□□□□□ -0.54
DDX56-210ENST00000479440 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 IFITM5A6NNB3 132 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 M0R2N4 97 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
DDX56-210ENST00000479440 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 DEFB131AP59861 70 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 FABP5Q01469 135 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 MLLT11Q13015 90 aaPredicted RBP11.67□□□□□ -0.54
DDX56-210ENST00000479440 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
DDX56-210ENST00000479440 CDNFQ49AH0 187 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 NDUFAF3Q9BU61 184 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 ANXA10Q9UJ72 324 aa11.67□□□□□ -0.54
DDX56-210ENST00000479440 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 K7EIM0 57 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms