RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GALMQ96C23 342 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF689Q96CS4 500 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PLEKHB2Q96CS7 222 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 MS4A6EQ96DS6 147 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SLC25A44Q96H78 314 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 LINC01587Q99440 93 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 TIMM17AQ99595 171 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 LRRC61Q9BV99 259 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PLA2G12AQ9BZM1 189 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PBOV1Q9GZY1 135 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 FGF22Q9HCT0 170 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 DHRS4-AS1Q9P1J3 65 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 NEU3Q9UQ49 428 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PSG8Q9UQ74 426 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 BTRCQ9Y297 605 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 KLF13Q9Y2Y9 288 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PYGO1Q9Y3Y4 419 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 RFNGQ9Y644 331 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ZNFX1Q9P2E3 1918 aaKnown RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SCN10AQ9Y5Y9 1956 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
HMGN4-202ENST00000477243 RNF213Q63HN8 5207 aa2.15□□□□□ -2.06
HMGN4-202ENST00000477243 GON4LQ3T8J9 2241 aa2.15□□□□□ -2.06
HMGN4-202ENST00000477243 MYH7P12883 1935 aa2.15□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV3-74A0A0B4J1X5 117 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV3-35A0A0C4DH35 117 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV1-69-2A0A0G2JMI3 117 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 A0A1B0GV90 55 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 CCDC160A6NGH7 325 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 SIGLEC16A6NMB1 481 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF705GA8MUZ8 300 aaPredicted RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 DLEU1O43261 78 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 GABARAPO95166 117 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 DUS4LO95620 317 aaKnown RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 IFNA7P01567 189 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 IGLV1-44P01699 117 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 LGALS1P09382 135 aaKnown RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 RBP1P09455 135 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 FBP1P09467 338 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF30P17039 623 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 G6PCP35575 357 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 GLRXP35754 106 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 CDKN2AP42771 156 aaKnown RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 PSMB3P49720 205 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 THBS3P49746 956 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 TAF6P49848 677 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 NUDT2P50583 147 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF140P52738 457 aaPredicted RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 EMP1P54849 157 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 LINC01547P58512 204 aaPredicted RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 TIMM10P62072 90 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 PPP1CAP62136 330 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 CDK5Q00535 292 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 RUNX3Q13761 415 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 C12orf74Q32Q52 190 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ABCA11PQ4W5N1 156 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 MESTQ5EB52 335 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 LEMD1Q68G75 181 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 SHISA6Q6ZSJ9 500 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 RFLNAQ6ZTI6 216 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF771Q7L3S4 317 aaPredicted RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 TCF23Q7RTU1 214 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF615Q8N8J6 731 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 Q8NBF4 154 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 OR8A1Q8NGG7 326 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 OR5A1Q8NGJ0 315 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 OR1J4Q8NGS1 313 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 OR1L1Q8NH94 360 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 LMO3Q8TAP4 145 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 THEM6Q8WUY1 208 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 CANT1Q8WVQ1 401 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 DCUN1D4Q92564 292 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 GHSRQ92847 366 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 STARD4Q96DR4 205 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM101Q96IK0 257 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 FOPNLQ96NB1 174 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 TSPAN32Q96QS1 320 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 OR52B2Q96RD2 323 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 F2RL3Q96RI0 385 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 LYSMD1Q96S90 227 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 C12orf57Q99622 126 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 C1orf50Q9BV19 199 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 SAMD10Q9BYL1 202 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 HEXA-AS1Q9H8Q6 139 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 HMG20AQ9NP66 347 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 KCNIP2Q9NS61 270 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 UQCC1Q9NVA1 299 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 DHCR7Q9UBM7 475 aaKnown RBP2.15□□□□□ -2.07
HMGN4-202ENST00000477243 MYRFQ9Y2G1 1151 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 PXMP4Q9Y6I8 212 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 CDK5RAP2Q96SN8 1893 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 PCNX2A6NKB5 2137 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 SCN5AQ14524 2016 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 IGSF9BQ9UPX0 1349 aa2.15□□□□□ -2.07
HMGN4-202ENST00000477243 DOCK8Q8NF50 2099 aa2.14□□□□□ -2.07
HMGN4-202ENST00000477243 TET2Q6N021 2002 aaPredicted RBP2.14□□□□□ -2.07
HMGN4-202ENST00000477243 COL7A1Q02388 2944 aa2.14□□□□□ -2.07
HMGN4-202ENST00000477243 IGKV1-27A0A075B6S5 117 aa2.14□□□□□ -2.07
HMGN4-202ENST00000477243 hCG_1818297A0A087WSY0 165 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms