RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 P04436 131 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-206ENST00000476391 CATR1Q13166 79 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 SLC23A3Q6PIS1 610 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 DPF1Q92782 380 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 SLC25A10Q9UBX3 287 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-206ENST00000476391 ANKRD30BLA7E2S9 258 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF816Q0VGE8 651 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-206ENST00000476391 KIR3DS1Q14943 382 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 FAM231DQ6ZW35 169 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 TPRX1Q8N7U7 411 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-206ENST00000476391 PERPQ96FX8 193 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 IGF2BP2-AS1Q96M15 143 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 OBP2AQ9NY56 170 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 MYO7AQ13402 2215 aa11.45□□□□□ -0.58
HDAC1-206ENST00000476391 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 UQCRFS1P47985 274 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 MYO9BQ13459 2157 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 CEACAM21Q3KPI0 293 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 LINC01545Q5VT33 79 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 LINC00173Q6ZV60 143 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 SLC22A18ASQ8N1D0 253 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 NUP35Q8NFH5 326 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 C5orf30Q96GV9 206 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 FER1L6-AS2Q96M78 137 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 METTL7AQ9H8H3 244 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 DLL3Q9NYJ7 618 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF207O43670 478 aaKnown RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 FOXH1O75593 365 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 NTF4P34130 210 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 MEF2CQ06413 473 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF542PQ5EBM4 170 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 TMEM196Q5HYL7 178 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 WDR31Q8NA23 367 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 NHLRC2Q8NBF2 726 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 OR13H1Q8NG92 308 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 FGF23Q9GZV9 251 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 MS4A5Q9H3V2 200 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 HSPB8Q9UJY1 196 aa11.44□□□□□ -0.58
HDAC1-206ENST00000476391 LSM4Q9Y4Z0 139 aaKnown RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 TSSC4Q9Y5U2 329 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-206ENST00000476391 FABP2P12104 132 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 FABP6P51161 128 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 SPINK9Q5DT21 86 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 SPATA31B1PQ5VZV4 182 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 POM121L2Q96KW2 1035 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 C1QTNF5Q9BXJ0 243 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 SH2D2AQ9NP31 389 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 PTPRSQ13332 1948 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 C5orf64Q2M2E5 130 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.43□□□□□ -0.58
HDAC1-206ENST00000476391 FAM168AQ92567 244 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 OR2H1Q9GZK4 316 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 PRDM14Q9GZV8 571 aa11.43□□□□□ -0.58
HDAC1-206ENST00000476391 MED12Q93074 2177 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 GFERP55789 205 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 RPL30P62888 115 aaKnown RBP11.42□□□□□ -0.58
HDAC1-206ENST00000476391 C1orf61Q13536 156 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 EIF4EBP1Q13541 118 aaPredicted RBP11.42□□□□□ -0.58
HDAC1-206ENST00000476391 LYSMD4Q5XG99 296 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
HDAC1-206ENST00000476391 IGHV3-20A0A0C4DH32 117 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 A0A1B0GXF2 115 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 AGFG2O95081 481 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 ADH4P08319 380 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 PCBD1P61457 104 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 PSG5Q15238 335 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 ZNF788Q6ZQV5 615 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 STPG3Q8N7X2 389 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 OR4A16Q8NH70 328 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 SSMEM1Q8WWF3 244 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 SSBP3Q9BWW4 388 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-206ENST00000476391 DUSP13Q9UII6 198 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 TNRC6AQ8NDV7 1962 aaKnown RBP11.41□□□□□ -0.58
HDAC1-206ENST00000476391 USF3Q68DE3 2245 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 K7EQM0 130 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 FGF6P10767 208 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 TNFRSF4P43489 277 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 RTL8BQ17RB0 113 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 PARM1Q6UWI2 310 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 TSTD1Q8NFU3 115 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 TAAR6Q96RI8 345 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
HDAC1-206ENST00000476391 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms