RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 RBPMS2Q6ZRY4 209 aaKnown RBP8.97□□□□□ -0.97
SMPD4-217ENST00000473720 UBAC2Q8NBM4 344 aa8.97□□□□□ -0.97
SMPD4-217ENST00000473720 CD300LFQ8TDQ1 290 aa8.97□□□□□ -0.97
SMPD4-217ENST00000473720 PLEKHA2Q9HB19 425 aa8.97□□□□□ -0.97
SMPD4-217ENST00000473720 UBQLN2Q9UHD9 624 aa8.97□□□□□ -0.97
SMPD4-217ENST00000473720 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.97
SMPD4-217ENST00000473720 TEX50A0A1B0GTY4 177 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 MARCH11A6NNE9 402 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 A8MWP6 167 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 PGLYRP1O75594 196 aaPredicted RBP8.96□□□□□ -0.98
SMPD4-217ENST00000473720 HLA-DMAP28067 261 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 POU2AF1Q16633 256 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 PHLDA2Q53GA4 152 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 CROCCP3Q8IVE0 287 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 FCAMRQ8WWV6 532 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 BORCS5Q969J3 196 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 COMMD9Q9P000 198 aa8.96□□□□□ -0.98
SMPD4-217ENST00000473720 CYB5BO43169 146 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 TGOLN2O43493 480 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 ZNF207O43670 478 aaKnown RBP8.95□□□□□ -0.98
SMPD4-217ENST00000473720 SNAPC5O75971 98 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 SERPINE2P07093 398 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 F2RP25116 425 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 PRSS3P35030 304 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 HRH1P35367 487 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 TSPAN5P62079 268 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 WT1-ASQ06250 92 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 ANKRD55Q3KP44 614 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 GDPD1Q8N9F7 314 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 OR1L6Q8NGR2 347 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 MOB3AQ96BX8 217 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 C20orf24Q9BUV8 137 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 FXYD6Q9H0Q3 95 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 VCX3AQ9NNX9 186 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 COMMD3Q9UBI1 195 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 UFC1Q9Y3C8 167 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 OR51B2Q9Y5P1 312 aa8.95□□□□□ -0.98
SMPD4-217ENST00000473720 LOC102724200A0A096LPH7 203 aaPredicted RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 GPR31O00270 319 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 EIF4EP06730 217 aaKnown RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 PTBP1P26599 531 aaKnown RBP eCLIP8.94□□□□□ -0.987e-7■■■■□ 19.6
SMPD4-217ENST00000473720 TAS2R46P59540 309 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 Q56UQ5 140 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 RNASE12Q5GAN4 147 aaKnown RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 DHRS11Q6UWP2 260 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 SNX29P2Q8IUI4 249 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 CMTM1Q8IZ96 169 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 OR6F1Q8NGZ6 308 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 IL17DQ8TAD2 202 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 DGCR14Q96DF8 476 aaKnown RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 YIPF6Q96EC8 236 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 GGTLC1Q9BX51 225 aa8.94□□□□□ -0.98
SMPD4-217ENST00000473720 MRPL27Q9P0M9 148 aaKnown RBP8.94□□□□□ -0.98
SMPD4-217ENST00000473720 A0A087WXM4 84 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 TMEM127O75204 238 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 JTBO76095 146 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 MFAP2P55001 183 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 KLK9Q2XQG4 91 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 THOC7Q6I9Y2 204 aaKnown RBP8.93□□□□□ -0.98
SMPD4-217ENST00000473720 SLC38A6Q8IZM9 456 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 VN1R17PQ8TDU5 208 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 LSM10Q969L4 123 aaKnown RBP8.93□□□□□ -0.98
SMPD4-217ENST00000473720 MARC2Q969Z3 335 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 MISP3Q96FF7 219 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 ZNF436Q9C0F3 470 aaPredicted RBP8.93□□□□□ -0.98
SMPD4-217ENST00000473720 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 KLK9Q9UKQ9 250 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 F11RQ9Y624 299 aaKnown RBP8.93□□□□□ -0.98
SMPD4-217ENST00000473720 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
SMPD4-217ENST00000473720 LYSTQ99698 3801 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 SMIM31A0A1B0GVY4 71 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 C8orf88P0DMB2 117 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 S100GP29377 79 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 VBP1P61758 197 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 NCS1P62166 190 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 HSD17B13Q7Z5P4 300 aaPredicted RBP8.92□□□□□ -0.98
SMPD4-217ENST00000473720 TBC1D26Q86UD7 250 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 LYSMD2Q8IV50 215 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 SCARB1Q8WTV0 552 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 TMEM190Q8WZ59 177 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 BSCL2Q96G97 398 aaPredicted RBP8.92□□□□□ -0.98
SMPD4-217ENST00000473720 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 CHRDL1Q9BU40 450 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 C21orf62Q9NYP8 219 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 ANAPC10Q9UM13 185 aa8.92□□□□□ -0.98
SMPD4-217ENST00000473720 IGKV3-7A0A075B6H7 116 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 IGHV3-49A0A0A0MS15 119 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 TRAV25A0A0B4J276 109 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 DBX1A6NMT0 343 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 FAM25AB3EWG3 89 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 FAM25CB3EWG5 89 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 FAM25GB3EWG6 89 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 HPGDSO60760 199 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 TNFAIP8O95379 198 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 IGHV3-48P01763 117 aa8.91□□□□□ -0.98
SMPD4-217ENST00000473720 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms