RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 JTBO76095 146 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 KRASP01116 189 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 SERPINE2P07093 398 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 RPS19P39019 145 aaKnown RBP9.92□□□□□ -0.82
CPSF4-210ENST00000469897 LPAR6P43657 344 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 HERV-K104P61576 105 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 WT1-ASQ06250 92 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 MARC2Q969Z3 335 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 SRSF8Q9BRL6 282 aaKnown RBP9.92□□□□□ -0.82
CPSF4-210ENST00000469897 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-210ENST00000469897 GGTLC1Q9BX51 225 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 HINT2Q9BX68 163 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 IFT46Q9NQC8 304 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 EHFQ9NZC4 300 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 NSG2Q9Y328 171 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
CPSF4-210ENST00000469897 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 OR2T8A6NH00 312 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 RLN1P04808 185 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 ELLP55199 621 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-210ENST00000469897 LSM3P62310 102 aaKnown RBP9.91□□□□□ -0.82
CPSF4-210ENST00000469897 OR2C3Q8N628 320 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 OR1L6Q8NGR2 347 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 VN1R17PQ8TDU5 208 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 FCAMRQ8WWV6 532 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 LYSTQ99698 3801 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 ZNF436Q9C0F3 470 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-210ENST00000469897 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
CPSF4-210ENST00000469897 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
CPSF4-210ENST00000469897 MARCH11A6NNE9 402 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 CYB5BO43169 146 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 TGOLN2O43493 480 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 TMEM127O75204 238 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 F2RP25116 425 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 G6PCP35575 357 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 MFAP2P55001 183 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 TAS2R20P59543 309 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 ERVK-16P61578 105 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 LYSMD2Q8IV50 215 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 SAMD12Q8N8I0 201 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 OR6F1Q8NGZ6 308 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 BORCS5Q969J3 196 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 MOB3AQ96BX8 217 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 DGCR14Q96DF8 476 aaKnown RBP9.9□□□□□ -0.82
CPSF4-210ENST00000469897 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 C5orf66Q9H5L9 145 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 COMMD9Q9P000 198 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 UBQLN2Q9UHD9 624 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
CPSF4-210ENST00000469897 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 SNAPC5O75971 98 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 FGF2P09038 288 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 NAT1P18440 290 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 PRSS3P35030 304 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 UBE2NLQ5JXB2 153 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 TMEM69Q5SWH9 247 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 HSD17B13Q7Z5P4 300 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-210ENST00000469897 CROCCP3Q8IVE0 287 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 SLC38A6Q8IZM9 456 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
CPSF4-210ENST00000469897 F11RQ9Y624 299 aaKnown RBP9.89□□□□□ -0.83
CPSF4-210ENST00000469897 ZNF207O43670 478 aaKnown RBP9.88□□□□□ -0.83
CPSF4-210ENST00000469897 HLA-DMAP28067 261 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 KCTD21Q4G0X4 260 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 THOC7Q6I9Y2 204 aaKnown RBP9.88□□□□□ -0.83
CPSF4-210ENST00000469897 LAMTOR1Q6IAA8 161 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 CMTM1Q8IZ96 169 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 UBAC2Q8NBM4 344 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 TMEM190Q8WZ59 177 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 LSM10Q969L4 123 aaKnown RBP9.88□□□□□ -0.83
CPSF4-210ENST00000469897 BSCL2Q96G97 398 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-210ENST00000469897 C20orf24Q9BUV8 137 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 C21orf62Q9NYP8 219 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 ANAPC10Q9UM13 185 aa9.88□□□□□ -0.83
CPSF4-210ENST00000469897 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-210ENST00000469897 K7EIM0 57 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 GPR31O00270 319 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 NDUFA4O00483 81 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 TSPAN4O14817 238 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 PHLDA2Q53GA4 152 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 Q56UQ5 140 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 SPSB3Q6PJ21 355 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 YIPF6Q96EC8 236 aa9.87□□□□□ -0.83
CPSF4-210ENST00000469897 SPAG8Q99932 426 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-210ENST00000469897 DAZ1Q9NQZ3 744 aaKnown RBP9.87□□□□□ -0.83
CPSF4-210ENST00000469897 TNCP24821 2201 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 A0A0J9YWU9 116 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 K7EMT4 169 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 SPRY2O43597 315 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 CTSGP08311 255 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 ADMP35318 185 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 HRH1P35367 487 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 TAS2R46P59540 309 aa9.86□□□□□ -0.83
CPSF4-210ENST00000469897 TSPAN5P62079 268 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms