RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 Q8N402 240 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 TSC22D3Q99576 134 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 SRSF8Q9BRL6 282 aaKnown RBP9.92□□□□□ -0.82
COL5A1-206ENST00000465877 PRNDQ9UKY0 176 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 DBX1A6NMT0 343 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 ZP3P21754 424 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 KLF9Q13886 244 aaPredicted RBP9.91□□□□□ -0.82
COL5A1-206ENST00000465877 SPANXN2Q5MJ10 180 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 OR10W1Q8NGF6 305 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 LSM10Q969L4 123 aaKnown RBP9.91□□□□□ -0.82
COL5A1-206ENST00000465877 FANCD2OSQ96PS1 177 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 THAP7Q9BT49 309 aaPredicted RBP9.91□□□□□ -0.82
COL5A1-206ENST00000465877 C5orf66Q9H5L9 145 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 TMEM14BQ9NUH8 114 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 MCUBQ9NWR8 336 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 PEF1Q9UBV8 284 aaKnown RBP9.91□□□□□ -0.82
COL5A1-206ENST00000465877 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 OR51B2Q9Y5P1 312 aa9.91□□□□□ -0.82
COL5A1-206ENST00000465877 TEX50A0A1B0GTY4 177 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 SAP30O75446 220 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 B3GALNT1O75752 331 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 TRAPPC2P0DI81 140 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 TRAPPC2BP0DI82 140 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 DEFA4P12838 97 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 HIST1H1BP16401 226 aaKnown RBP9.9□□□□□ -0.82
COL5A1-206ENST00000465877 UCP1P25874 307 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 FAUP35544 74 aaKnown RBP9.9□□□□□ -0.82
COL5A1-206ENST00000465877 ETV6P41212 452 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 INSL3P51460 131 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 AP3S2P59780 193 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 ATP5G2Q06055 141 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 WT1-ASQ06250 92 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 KLK9Q2XQG4 91 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 TRIM16LQ309B1 348 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 HSD17B13Q7Z5P4 300 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-206ENST00000465877 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 OR5B3Q8NH48 314 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 RTBDNQ9BSG5 229 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-206ENST00000465877 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 NAA60Q9H7X0 242 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 FBXL7Q9UJT9 491 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
COL5A1-206ENST00000465877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.89□□□□□ -0.83
COL5A1-206ENST00000465877 WI2-2373I1.2A0A1W2PRP0 233 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 CRYM-AS1A6NIL9 109 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 K7EIL1 84 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 BMPR1BO00238 502 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 OR5AC1P0C628 307 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 P0C879 139 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 RPEL1Q2QD12 228 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 SP6Q3SY56 376 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 ACSM6Q6P461 480 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 ZNF429Q86V71 674 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 OR6Q1Q8NGQ2 317 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 CCDC140Q96MF4 163 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 SRRQ9GZT4 340 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM222Q9H0R3 208 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 FKBP11Q9NYL4 201 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 ZMAT5Q9UDW3 170 aaKnown RBP9.89□□□□□ -0.83
COL5A1-206ENST00000465877 GPR132Q9UNW8 380 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 DMRT1Q9Y5R6 373 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
COL5A1-206ENST00000465877 TEX13DA0A0J9YY54 714 aaPredicted RBP9.88□□□□□ -0.83
COL5A1-206ENST00000465877 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 PPP5D1E7EU14 171 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 ATG12O94817 140 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 NDUFB8O95169 186 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
COL5A1-206ENST00000465877 SYNJ2BPP57105 145 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 IZUMO4Q1ZYL8 232 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 RNASE11Q8TAA1 199 aaKnown RBP9.88□□□□□ -0.83
COL5A1-206ENST00000465877 DEDD2Q8WXF8 326 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM230Q96A57 120 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 F11RQ9Y624 299 aaKnown RBP9.88□□□□□ -0.83
COL5A1-206ENST00000465877 S4R3C0 116 aa9.88□□□□□ -0.83
COL5A1-206ENST00000465877 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 CYB5BO43169 146 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 PRCDQ00LT1 54 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 KLF5Q13887 457 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-206ENST00000465877 OR9G4Q8NGQ1 327 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 LHFPL5Q8TAF8 219 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 RBPMSQ93062 196 aaKnown RBP9.87□□□□□ -0.83
COL5A1-206ENST00000465877 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 SCGB3A2Q96PL1 93 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 PRR25Q96S07 402 aa9.87□□□□□ -0.83
COL5A1-206ENST00000465877 ELOVL1Q9BW60 279 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms