RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 OR52I2Q8NH67 350 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 LSM10Q969L4 123 aaKnown RBP7.72□□□□□ -1.17
SF3A3-204ENST00000462258 CXorf58Q96LI9 332 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 THAP7Q9BT49 309 aaPredicted RBP7.72□□□□□ -1.17
SF3A3-204ENST00000462258 HINT2Q9BX68 163 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 THYN1Q9P016 225 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 NSG2Q9Y328 171 aa7.72□□□□□ -1.17
SF3A3-204ENST00000462258 TRBV7-1A0A0A6YYK4 115 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 TEX50A0A1B0GTY4 177 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 C2orf70A6NJV1 201 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 C15orf61A6NNL5 157 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 A8MWP6 167 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 LGALS9O00182 355 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 RGS5O15539 181 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 SNAPC5O75971 98 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 OR2C1O95371 312 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 CD3DP04234 171 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 IFNA6P05013 189 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 OR13C7P0DN81 318 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 PGAM2P15259 253 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 TBPP20226 339 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 EDN2P20800 178 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 PPP5CP53041 499 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 SPCS2Q15005 226 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 CD300EQ496F6 205 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-204ENST00000462258 ADAMTSL5Q6ZMM2 481 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 LHFPL1Q86WI0 220 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 CLVS1Q8IUQ0 354 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-204ENST00000462258 CADM3Q8N126 398 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 ARRDC1Q8N5I2 433 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 RAB2BQ8WUD1 216 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 RCHY1Q96PM5 261 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 MIXL1Q9H2W2 232 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 ZC4H2Q9NQZ6 224 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 NDUFA4L2Q9NRX3 87 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 FAM212BQ9NTI7 297 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-204ENST00000462258 KLK11Q9UBX7 282 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 MTFP1Q9UDX5 166 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 PRNDQ9UKY0 176 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 OR51B2Q9Y5P1 312 aa7.71□□□□□ -1.18
SF3A3-204ENST00000462258 TMEM213A2RRL7 107 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 A8MZ25 164 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 TPPPO94811 219 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 IGKV1-39P01597 117 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 IGKV1D-39P04432 117 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 SERPINE2P07093 398 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 FOLR2P14207 255 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 MECP2P51608 486 aaKnown RBP7.7□□□□□ -1.18
SF3A3-204ENST00000462258 RND3P61587 244 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 GPHB5Q86YW7 130 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 CACNG8Q8WXS5 425 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 MRGPRFQ96AM1 343 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 ZNF486Q96H40 463 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-204ENST00000462258 ABHD1Q96SE0 405 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 TMEM14BQ9NUH8 114 aa7.7□□□□□ -1.18
SF3A3-204ENST00000462258 CCDC59Q9P031 241 aaKnown RBP7.7□□□□□ -1.18
SF3A3-204ENST00000462258 F11RQ9Y624 299 aaKnown RBP7.7□□□□□ -1.18
SF3A3-204ENST00000462258 DBX1A6NMT0 343 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 GABARAPH6UMI1 98 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TGOLN2O43493 480 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 NOL3O60936 208 aaKnown RBP7.69□□□□□ -1.18
SF3A3-204ENST00000462258 CD74P04233 296 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 PI3P19957 117 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 PTBP1P26599 531 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3A3-204ENST00000462258 PIGPP57054 158 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TAS2R19P59542 299 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 CD81P60033 236 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 MRPS10P82664 201 aaKnown RBP7.69□□□□□ -1.18
SF3A3-204ENST00000462258 FAM106AQ4KMX7 169 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 SLC25A24Q6NUK1 477 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TMEM229BQ8NBD8 167 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 OR4D10Q8NGI6 311 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 VN1R17PQ8TDU5 208 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 SEC22AQ96IW7 307 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TMEM56Q96MV1 263 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 BCL7BQ9BQE9 202 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 FKBP11Q9NYL4 201 aa7.69□□□□□ -1.18
SF3A3-204ENST00000462258 TECRQ9NZ01 308 aaKnown RBP7.69□□□□□ -1.18
SF3A3-204ENST00000462258 DYNC2H1Q8NCM8 4307 aaKnown RBP7.69□□□□□ -1.18
SF3A3-204ENST00000462258 ZNF320A2RRD8 509 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 OR2T8A6NH00 312 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 RAB3DO95716 219 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 CLEC3BP05452 202 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 CBLN1P23435 193 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 AKR1C2P52895 323 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 MFAP2P55001 183 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 SSBP1Q04837 148 aaKnown RBP7.68□□□□□ -1.18
SF3A3-204ENST00000462258 GUCA2BQ16661 112 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 SCGB2B2Q4G0G5 96 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 STEAP1BQ6NZ63 245 aa7.68□□□□□ -1.18
SF3A3-204ENST00000462258 PLET1Q6UQ28 207 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms