RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	MECP2	P51608	486 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	MRPS10	P82664	201 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	SCGB2B2	Q4G0G5	96 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	LCN12	Q6JVE5	192 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	H2BFWT	Q7Z2G1	175 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	GDPD1	Q8N9F7	314 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	TMEM229B	Q8NBD8	167 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	DYNC2LI1	Q8TCX1	351 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	DYNLRB2	Q8TF09	96 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	LSM10	Q969L4	123 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	ZNF486	Q96H40	463 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	CCDC140	Q96MF4	163 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	PRND	Q9UKY0	176 aa		12.04	□□□□□ -0.48
HDLBP-223	ENST00000449864	TRBV7-1	A0A0A6YYK4	115 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	RAB3D	O95716	219 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	SERPINE2	P07093	398 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	OR13C7	P0DN81	318 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	PI3	P19957	117 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	IL18	Q14116	193 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	LHFPL1	Q86WI0	220 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	SGPP2	Q8IWX5	399 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	MRGPRF	Q96AM1	343 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	DIRAS2	Q96HU8	199 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	FKBP11	Q9NYL4	201 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	SIGLEC8	Q9NYZ4	499 aa		12.03	□□□□□ -0.48
HDLBP-223	ENST00000449864	MFSD2B	A6NFX1	497 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	C15orf61	A6NNL5	157 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR2C1	O95371	312 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	FRMD6-AS1	P0C7T7	363 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	PIGP	P57054	158 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	RND3	P61587	244 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	SSBP1	Q04837	148 aa	Known RBP	12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	WT1-AS	Q06250	92 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	KLK9	Q2XQG4	91 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	STEAP1B	Q6NZ63	245 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	GTSCR1	Q86UQ5	136 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	CADM3	Q8N126	398 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864		Q8N402	240 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR4D10	Q8NGI6	311 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR5B3	Q8NH48	314 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR4A16	Q8NH70	328 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	ISOC1	Q96CN7	298 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	TMEM56	Q96MV1	263 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	NDUFA4L2	Q9NRX3	87 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864	KLK9	Q9UKQ9	250 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864		U3KQK5	164 aa		12.02	□□□□□ -0.49
HDLBP-223	ENST00000449864		H3BMQ9	156 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	CD74	P04233	296 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	PTBP1	P26599	531 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	GPR183	P32249	361 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	MEF2D	Q14814	521 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	FAM106A	Q4KMX7	169 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	SLC25A24	Q6NUK1	477 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	CCDC71L	Q8N9Z2	235 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR2K2	Q8NGT1	345 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	ZFAND1	Q8TCF1	268 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	SMIM4	Q8WVI0	70 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	SEC22A	Q96IW7	307 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	ZC4H2	Q9NQZ6	224 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	COPZ2	Q9P299	210 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	RABL2B	Q9UNT1	228 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	DMRT1	Q9Y5R6	373 aa		12.01	□□□□□ -0.49
HDLBP-223	ENST00000449864	ZNF320	A2RRD8	509 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	C2orf70	A6NJV1	201 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	LGALS9	O00182	355 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	IGKV1-39	P01597	117 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	IGKV1D-39	P04432	117 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	AKR1C2	P52895	323 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	FAAP20	Q6NZ36	180 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	GPHB5	Q86YW7	130 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR13C8	Q8NGS7	320 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	TERB2	Q8NHR7	220 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	MARCH1	Q8TCQ1	289 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	TMEM14B	Q9NUH8	114 aa		12	□□□□□ -0.49
HDLBP-223	ENST00000449864	F11R	Q9Y624	299 aa	Known RBP	12	□□□□□ -0.49
HDLBP-223	ENST00000449864	C3orf85	A0A1B0GTC6	90 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	CCDC160	A6NGH7	325 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	DBX1	A6NMT0	343 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	DISC1	C4P0D8	188 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	ATG12	O94817	140 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	CLEC3B	P05452	202 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	IGHV4-30-4	P0DP06	118 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	FOLR2	P14207	255 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	TRIM16L	Q309B1	348 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	OR1L6	Q8NGR2	347 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	MCFD2	Q8NI22	146 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	ZNF502	Q8TBZ5	544 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	VN1R17P	Q8TDU5	208 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	WWC2-AS2	Q96NR7	200 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	TP53RK	Q96S44	253 aa		11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	C14orf166	Q9Y224	244 aa	Known RBP	11.99	□□□□□ -0.49
HDLBP-223	ENST00000449864	IZUMO1R	A6ND01	250 aa		11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	CTDSPL	O15194	276 aa		11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	AKAIN1	P0CW23	69 aa		11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	EDN2	P20800	178 aa		11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	CD300E	Q496F6	205 aa	Predicted RBP	11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	PLET1	Q6UQ28	207 aa		11.98	□□□□□ -0.49
HDLBP-223	ENST00000449864	SBSPON	Q8IVN8	264 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms