RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SRSF8Q9BRL6 282 aaKnown RBP13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 CCL28Q9NRJ3 127 aa13.47□□□□□ -0.25
UPK3BP1-201ENST00000428678 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 MPTX1A8MV57 137 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 SULT1C2O00338 296 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 NQO2P16083 231 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 TAS2R31P59538 309 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 ARPC4P59998 168 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 ZNF124Q15973 351 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 SPSB3Q6PJ21 355 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 NR2C2APQ86WQ0 139 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 CHRDL1Q9BU40 450 aa13.46□□□□□ -0.25
UPK3BP1-201ENST00000428678 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 SSX5O60225 188 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 OR13C7P0DN81 318 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 FCGR2CP31995 323 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 TFPI2P48307 235 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 OR13F1Q8NGS4 319 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 C2CD4CQ8TF44 421 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 C11orf68Q9H3H3 251 aaKnown RBP13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 TMEM140Q9NV12 185 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 C21orf62Q9NYP8 219 aa13.45□□□□□ -0.26
UPK3BP1-201ENST00000428678 HPRT1P00492 218 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 SERPINE2P07093 398 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 PTHLHP12272 177 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 CATR1Q13166 79 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 MSMO1Q15800 293 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 POU2AF1Q16633 256 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 C22orf42Q6IC83 251 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 ZNF367Q7RTV3 350 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 RNF2Q99496 336 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 SLC5A7Q9GZV3 580 aa13.44□□□□□ -0.26
UPK3BP1-201ENST00000428678 IGKV3-7A0A075B6H7 116 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 TRDV1A0A1B0GX56 115 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 K7EMT4 169 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 DEFB4AO15263 64 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 SCGNO76038 276 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 AQP4P55087 323 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 WT1-ASQ06250 92 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 Q56UQ5 140 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 THOC7Q6I9Y2 204 aaKnown RBP13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 ZBTB34Q8NCN2 500 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 BEST4Q8NFU0 473 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 OR51H1Q8NH63 302 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 HINT2Q9BX68 163 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 NDUFB11Q9NX14 153 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 SMPXQ9UHP9 88 aa13.43□□□□□ -0.26
UPK3BP1-201ENST00000428678 C15orf62A8K5M9 175 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 PPYP01298 95 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 ADMP35318 185 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 MFAP2P55001 183 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 CMC4P56277 68 aaPredicted RBP13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 TCTAP57738 103 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 FXYD4P59646 89 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 TBCEQ15813 527 aaPredicted RBP13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 ZNF773Q6PK81 442 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 HSD17B13Q7Z5P4 300 aaPredicted RBP13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 SCARB1Q8WTV0 552 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 F11RQ9Y624 299 aaKnown RBP13.42□□□□□ -0.26
UPK3BP1-201ENST00000428678 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 TEX50A0A1B0GTY4 177 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 NOTOA8MTQ0 251 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 IGLL5B9A064 214 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 FGF2P09038 288 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 ERVK-16P61578 105 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 AADACL3Q5VUY0 350 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 GVQW1Q8N7I0 195 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 RHPN1-AS1Q9BWJ2 59 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 PLEKHA2Q9HB19 425 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
UPK3BP1-201ENST00000428678 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 K7EIM0 57 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 CHEK1O14757 476 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 YIF1AO95070 293 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 TMEM17Q86X19 198 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 GBGT1Q8N5D6 347 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 TMEM116Q8NCL8 245 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 CMTM3Q96MX0 182 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
UPK3BP1-201ENST00000428678 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 FCER2P06734 321 aa13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 ZNF818PQ6ZRF7 136 aa13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 LGALS14Q8TCE9 139 aa13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 RHBDL2Q9NX52 303 aa13.39□□□□□ -0.27
UPK3BP1-201ENST00000428678 MARCH11A6NNE9 402 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms