RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PTBP1P26599 531 aaKnown RBP eCLIP13.27□□□□□ -0.29
GPC1-203ENST00000425056 RPL5P46777 297 aaKnown RBP13.27□□□□□ -0.29
GPC1-203ENST00000425056 ELLP55199 621 aaPredicted RBP13.27□□□□□ -0.29
GPC1-203ENST00000425056 ANKRD55Q3KP44 614 aa13.27□□□□□ -0.29
GPC1-203ENST00000425056 ZNF436Q9C0F3 470 aaPredicted RBP13.27□□□□□ -0.29
GPC1-203ENST00000425056 EHFQ9NZC4 300 aa13.27□□□□□ -0.29
GPC1-203ENST00000425056 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 JTBO76095 146 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 ALDH3B2P48448 385 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 PLET1Q6UQ28 207 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 DHRS11Q6UWP2 260 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
GPC1-203ENST00000425056 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 OR10W1Q8NGF6 305 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 VN1R17PQ8TDU5 208 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 MOB3AQ96BX8 217 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 GGTLC1Q9BX51 225 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
GPC1-203ENST00000425056 UFC1Q9Y3C8 167 aa13.26□□□□□ -0.29
GPC1-203ENST00000425056 HYDINQ4G0P3 5121 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 CYB5BO43169 146 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 TGOLN2O43493 480 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 RLN1P04808 185 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 SERPINE2P07093 398 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 F2RP25116 425 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 ERVK-16P61578 105 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 WT1-ASQ06250 92 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 UBE2NLQ5JXB2 153 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 CADM3Q8N126 398 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 TMEM190Q8WZ59 177 aa13.25□□□□□ -0.29
GPC1-203ENST00000425056 S100A16Q96FQ6 103 aaKnown RBP13.25□□□□□ -0.29
GPC1-203ENST00000425056 LOC102724200A0A096LPH7 203 aaPredicted RBP13.24□□□□□ -0.29
GPC1-203ENST00000425056 IGHV3-35A0A0C4DH35 117 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 PGLYRP1O75594 196 aaPredicted RBP13.24□□□□□ -0.29
GPC1-203ENST00000425056 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 RPA2P15927 270 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 NAT1P18440 290 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 TGFBR1P36897 503 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 RFX2P48378 723 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 TAS2R46P59540 309 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 ZNF585BQ52M93 769 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
GPC1-203ENST00000425056 GPR141Q7Z602 305 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 OR1L8Q8NGR8 309 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
GPC1-203ENST00000425056 ZNF2Q9BSG1 426 aaPredicted RBP13.24□□□□□ -0.29
GPC1-203ENST00000425056 TEX50A0A1B0GTY4 177 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 TAS2R20P59543 309 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
GPC1-203ENST00000425056 YIPF6Q96EC8 236 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 BSCL2Q96G97 398 aaPredicted RBP13.23□□□□□ -0.29
GPC1-203ENST00000425056 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
GPC1-203ENST00000425056 OVOL2Q9BRP0 275 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 FXYD6Q9H0Q3 95 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 C5orf66Q9H5L9 145 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
GPC1-203ENST00000425056 NDUFA4L2Q9NRX3 87 aa13.23□□□□□ -0.29
GPC1-203ENST00000425056 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
GPC1-203ENST00000425056 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 MFAP2P55001 183 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 SAMD12Q8N8I0 201 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 OR5H2Q8NGV7 314 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 FCAMRQ8WWV6 532 aa13.22□□□□□ -0.29
GPC1-203ENST00000425056 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
GPC1-203ENST00000425056 ALMS1Q8TCU4 4167 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 PLECQ15149 4684 aaKnown RBP13.21□□□□□ -0.29
GPC1-203ENST00000425056 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
GPC1-203ENST00000425056 TSPAN4O14817 238 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 KRASP01116 189 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 PMP2P02689 132 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 RPS19P39019 145 aaKnown RBP13.21□□□□□ -0.29
GPC1-203ENST00000425056 LPAR6P43657 344 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 SLC25A24Q6NUK1 477 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 FUNDC2Q9BWH2 189 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
GPC1-203ENST00000425056 BIRC6Q9NR09 4857 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 K7EIM0 57 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 GPR31O00270 319 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 NDUFA4O00483 81 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 G6PCP35575 357 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 SLC38A6Q8IZM9 456 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 OR5B3Q8NH48 314 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 HINT2Q9BX68 163 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 PRNDQ9UKY0 176 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 NSG2Q9Y328 171 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 OR51B2Q9Y5P1 312 aa13.2□□□□□ -0.3
GPC1-203ENST00000425056 SNAPC5O75971 98 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 PRSS3P35030 304 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 HRH1P35367 487 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 SCARB1Q8WTV0 552 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 CHRDL1Q9BU40 450 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms