RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 KLHDC2Q9Y2U9 406 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 STRAPQ9Y3F4 350 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 ARL5AQ9Y689 179 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 THSD7AQ9UPZ6 1657 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 MDC1Q14676 2089 aaKnown RBP2.17□□□□□ -2.06
LINC01040-201ENST00000425048 DOCK9Q9BZ29 2069 aa2.17□□□□□ -2.06
LINC01040-201ENST00000425048 NCOA6Q14686 2063 aaPredicted RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PTPRBP23467 1997 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 EXPH5Q8NEV8 1989 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM131Q92545 1883 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TRAV8-7A0A075B6U6 113 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 A0A087WX48 190 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 A0A1B0GUS0 222 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR6C6A6NF89 314 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RBFOX3A6NFN3 312 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 F5H5T6 163 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 F8WDY8 70 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PIN1P1O15428 100 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 S1PR2O95136 353 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CNIH1O95406 144 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CDS2O95674 445 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 HAND1O96004 215 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TYMSP04818 313 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SEC11BP0C7V7 166 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CTSEP14091 401 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 FUT1P19526 365 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CDK2P24941 298 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 S100GP29377 79 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 NTSP30990 170 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 GYG1P46976 350 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CX3CR1P49238 355 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CNN1P51911 297 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R43P59537 309 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PLP1P60201 277 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RPS14P62263 151 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RPS11P62280 158 aaKnown RBP eCLIP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RPL23AP62750 156 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CCL20P78556 96 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 HLA-DRB3P79483 266 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SSBP1Q04837 148 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SRSF6Q13247 344 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PPP1R1AQ13522 171 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF266Q14584 549 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MEP1BQ16820 701 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MPV17LQ2QL34 196 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ACOT6Q3I5F7 207 aaPredicted RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SLC25A52Q3SY17 297 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ACSM3Q53FZ2 586 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PHYHD1Q5SRE7 291 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CARD17Q5XLA6 110 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PLCXD3Q63HM9 321 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PET117Q6UWS5 81 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 Q6ZN92 141 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 FOXI2Q6ZQN5 318 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 Q6ZSR6 202 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 LRRC70Q7Z2Q7 622 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 DOLPP1Q86YN1 238 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR8I2Q8N0Y5 310 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 LGI3Q8N145 548 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 LINC00471Q8N535 108 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CLDN19Q8N6F1 224 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF615Q8N8J6 731 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CYB561D1Q8N8Q1 229 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF709Q8N972 641 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM229BQ8NBD8 167 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR51L1Q8NGJ5 315 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR52E5Q8NH55 327 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MFSD8Q8NHS3 518 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SYNPRQ8TBG9 265 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SLC25A40Q8TBP6 338 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 C15orf40Q8WUR7 153 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 BLNKQ8WV28 456 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 AQP3Q92482 292 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 PTH2Q96A98 100 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 APOBEC3DQ96AK3 386 aaPredicted RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ZMYND19Q96E35 227 aaPredicted RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 GPR82Q96P67 336 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 DERL3Q96Q80 235 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TSPAN32Q96QS1 320 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TBX5Q99593 518 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RARRES2Q99969 163 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 TBL1YQ9BQ87 522 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 RSG1Q9BU20 258 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 EIF5A2Q9GZV4 153 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CST11Q9H112 138 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 POLR2J3Q9H1A7 115 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 SLC25A51Q9H1U9 297 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR52D1Q9H346 318 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 NPVFQ9HCQ7 196 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR2S2Q9NQN1 319 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 CMC2Q9NRP2 79 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MTCH1Q9NZJ7 389 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 OR5V1Q9UGF6 321 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF391Q9UJN7 358 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 ERG28Q9UKR5 140 aa2.16□□□□□ -2.06
LINC01040-201ENST00000425048 BOKQ9UMX3 212 aaPredicted RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 MRPS33Q9Y291 106 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 NOP16Q9Y3C1 178 aaKnown RBP2.16□□□□□ -2.06
LINC01040-201ENST00000425048 UFC1Q9Y3C8 167 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms