RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ATP6V0BQ99437 205 aa12.45□□□□□ -0.42
UPF3AP3-201ENST00000420996 PLEKHA2Q9HB19 425 aa12.45□□□□□ -0.42
UPF3AP3-201ENST00000420996 K7EMT4 169 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 NDUFA4O00483 81 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 PPYP01298 95 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 SERPINE2P07093 398 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 OR13C7P0DN81 318 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 SLC25A24Q6NUK1 477 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 HSD17B13Q7Z5P4 300 aaPredicted RBP12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 CD300LFQ8TDQ1 290 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 SLC5A7Q9GZV3 580 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
UPF3AP3-201ENST00000420996 CTSDP07339 412 aaPredicted RBP12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 PTHLHP12272 177 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 GVQW1Q8N7I0 195 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 CHRDL1Q9BU40 450 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 C20orf24Q9BUV8 137 aa12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 C6orf62Q9GZU0 229 aaPredicted RBP12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 TXNL4BQ9NX01 149 aaKnown RBP12.43□□□□□ -0.42
UPF3AP3-201ENST00000420996 TEX50A0A1B0GTY4 177 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 FCGR2BP31994 310 aaPredicted RBP12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 GATAD1Q8WUU5 269 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 RHBDL2Q9NX52 303 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 C21orf62Q9NYP8 219 aa12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 RRP15Q9Y3B9 282 aaKnown RBP12.42□□□□□ -0.42
UPF3AP3-201ENST00000420996 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 C15orf62A8K5M9 175 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 ADMP35318 185 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 MFAP2P55001 183 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 FXYD4P59646 89 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 SFXN4Q6P4A7 337 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 ZNF818PQ6ZRF7 136 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 APRG1Q8IVJ8 170 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 OR1L8Q8NGR8 309 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 SCARB1Q8WTV0 552 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 GIMAP1Q8WWP7 306 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
UPF3AP3-201ENST00000420996 IGHV3-21A0A0B4J1V1 117 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 ZNF207O43670 478 aaKnown RBP12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 SCAND1P57086 179 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 ERVK-16P61578 105 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 AADACL3Q5VUY0 350 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 RARRES2Q99969 163 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 MFFQ9GZY8 342 aa12.4□□□□□ -0.42
UPF3AP3-201ENST00000420996 UBE2UQ5VVX9 321 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 CADM3Q8N126 398 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 BORCS5Q969J3 196 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 RNF2Q99496 336 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 ETV7Q9Y603 341 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 HERC2O95714 4834 aa12.39□□□□□ -0.43
UPF3AP3-201ENST00000420996 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 A6NJ64 397 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 MARCH11A6NNE9 402 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 K7EIM0 57 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 CHEK1O14757 476 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 MRPS14O60783 128 aaKnown RBP12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 IFNA4P05014 189 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 CTSGP08311 255 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 HSPA13P48723 471 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 NANOS2P60321 138 aaKnown RBP12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 ZNF124Q15973 351 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 Q56UQ5 140 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 TMEM116Q8NCL8 245 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 SLC25A38Q96DW6 304 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 RHPN1-AS1Q9BWJ2 59 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 SSR3Q9UNL2 185 aa12.38□□□□□ -0.43
UPF3AP3-201ENST00000420996 IGHV7-4-1A0A0J9YVY3 117 aa12.37□□□□□ -0.43
UPF3AP3-201ENST00000420996 FCER2P06734 321 aa12.37□□□□□ -0.43
UPF3AP3-201ENST00000420996 F2RP25116 425 aa12.37□□□□□ -0.43
UPF3AP3-201ENST00000420996 GNRHRP30968 328 aa12.37□□□□□ -0.43
UPF3AP3-201ENST00000420996 CBX5P45973 191 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms