RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 THYN1Q9P016 225 aa7.45□□□□□ -1.22
TNFAIP3-202ENST00000420009 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
TNFAIP3-202ENST00000420009 SPATA2Q9UM82 520 aa7.45□□□□□ -1.22
TNFAIP3-202ENST00000420009 OR2T8A6NH00 312 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 C11orf94C9JXX5 98 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 F8W735 103 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 K7EMT4 169 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 DEFB4AO15263 64 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 XRCC3O43542 346 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 FGF2P09038 288 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 CTXN2P0C2S0 81 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 RAB6AP20340 208 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 TNP2Q05952 138 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 TRAM1Q15629 374 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 SPSB3Q6PJ21 355 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 ZNF66Q6ZN08 573 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 MFSD4AQ8N468 514 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 GDPD1Q8N9F7 314 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 Q8NAQ8 132 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 ZNF414Q96IQ9 312 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 GPHA2Q96T91 129 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 CHRDL1Q9BU40 450 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 TAS2R8Q9NYW2 309 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 ETV7Q9Y603 341 aa7.44□□□□□ -1.22
TNFAIP3-202ENST00000420009 IGHV3OR16-8A0A075B7F1 116 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 C15orf62A8K5M9 175 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 RBFOX2O43251 390 aaKnown RBP eCLIP7.43□□□□□ -1.226e-7■■■□□ 16.3
TNFAIP3-202ENST00000420009 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 PSMA1P25786 263 aaKnown RBP7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 FABP5Q01469 135 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 POU2AF1Q16633 256 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 RNF2Q99496 336 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 C20orf24Q9BUV8 137 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 SMPXQ9UHP9 88 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 MUC4Q99102 2169 aa7.43□□□□□ -1.22
TNFAIP3-202ENST00000420009 TRAV3A0A0B4J244 114 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 IFITM5A6NNB3 132 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 RTL8CO15255 209 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 CA1P00915 261 aaPredicted RBP7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 CMC4P56277 68 aaPredicted RBP7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 OR10A3P58181 314 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 WT1-ASQ06250 92 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 TMEM187Q14656 261 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 ARL6IP1Q15041 203 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 MSMO1Q15800 293 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 THOC7Q6I9Y2 204 aaKnown RBP7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 CNIH2Q6PI25 160 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 OR10W1Q8NGF6 305 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 AIFM2Q9BRQ8 373 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 DCSTAMPQ9H295 470 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 HRASLSQ9HDD0 168 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 C21orf62Q9NYP8 219 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 LRP1BQ9NZR2 4599 aa7.42□□□□□ -1.22
TNFAIP3-202ENST00000420009 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 IGHV7-4-1A0A0J9YVY3 117 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 METTL21EPA6NDL7 271 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 PTGES3LE9PB15 166 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 UPK2O00526 184 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 CHEK1O14757 476 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 CYB5BO43169 146 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 SERPINE2P07093 398 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 TFPI2P48307 235 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 TAS2R31P59538 309 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 MLLT11Q13015 90 aaPredicted RBP7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 HACD4Q5VWC8 232 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 Q6ZTC4 211 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 HSD17B13Q7Z5P4 300 aaPredicted RBP7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 SPAG16Q8N0X2 631 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 SCARB1Q8WTV0 552 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 RHPN1-AS1Q9BWJ2 59 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 COMMD5Q9GZQ3 224 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 ACOT13Q9NPJ3 140 aa7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
TNFAIP3-202ENST00000420009 TRAV1-2A0A0B4J238 106 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 TRAV10A0A0B4J240 114 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 K7EIM0 57 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 TNFSF12O43508 249 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 MRPS14O60783 128 aaKnown RBP7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 AMBPP02760 352 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 HSMCR30P0CW71 290 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 RBMY1A1P0DJD3 496 aaKnown RBP7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 RBMY1CP0DJD4 496 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 OR13C7P0DN81 318 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 NQO2P16083 231 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 HLA-DMBP28068 263 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 RBMY1FQ15415 496 aaKnown RBP7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 CDNFQ49AH0 187 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 ZNF773Q6PK81 442 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 NUDCD2Q8WVJ2 157 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 OR10C1Q96KK4 312 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 RNF126Q9BV68 326 aa7.4□□□□□ -1.22
TNFAIP3-202ENST00000420009 TMEM140Q9NV12 185 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms