RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RFX2P48378 723 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 TAS2R31P59538 309 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 ZNF79Q15937 498 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 ZNF818PQ6ZRF7 136 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 CCDC190Q86UF4 302 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 CD300LFQ8TDQ1 290 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 DYNLRB2Q8TF09 96 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 EEF1AKMT3Q96AZ1 226 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 DIRAS2Q96HU8 199 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 NEURL2Q9BR09 285 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 EDA2RQ9HAV5 297 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 SCPEP1Q9HB40 452 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 PALMDQ9NP74 551 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 TECRQ9NZ01 308 aaKnown RBP7.13□□□□□ -1.27
NUP50-205ENST00000419387 MTFP1Q9UDX5 166 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 V9GYH0 126 aa7.13□□□□□ -1.27
NUP50-205ENST00000419387 TRBV7-1A0A0A6YYK4 115 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 TRAV3A0A0B4J244 114 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 UPK2O00526 184 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 IFNA6P05013 189 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 REG1AP05451 166 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 CD7P09564 240 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 EDN2P20800 178 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 GNRHRP30968 328 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 ETV6P41212 452 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 OR2B8PP59922 312 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 CD81P60033 236 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 HERV-K104P61576 105 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 POU2AF1Q16633 256 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
NUP50-205ENST00000419387 TMEM17Q86X19 198 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 OR51H1Q8NH63 302 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 BORCS5Q969J3 196 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 SDHCQ99643 169 aaPredicted RBP7.12□□□□□ -1.27
NUP50-205ENST00000419387 COMMD5Q9GZQ3 224 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 C6orf62Q9GZU0 229 aaPredicted RBP7.12□□□□□ -1.27
NUP50-205ENST00000419387 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 SLC2A8Q9NY64 477 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 S4R3C0 116 aa7.12□□□□□ -1.27
NUP50-205ENST00000419387 IGLV11-55A0A075B6I3 123 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 ZNF320A2RRD8 509 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 GABARAPH6UMI1 98 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 GSTZ1O43708 216 aaPredicted RBP7.11□□□□□ -1.27
NUP50-205ENST00000419387 NOL3O60936 208 aaKnown RBP7.11□□□□□ -1.27
NUP50-205ENST00000419387 S1PR2O95136 353 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 PMP2P02689 132 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 CLEC3BP05452 202 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 FGF2P09038 288 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 CBLN1P23435 193 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 GUCA2BQ16661 112 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 AADACL3Q5VUY0 350 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 ZFAND6Q6FIF0 208 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 DEFB125Q8N687 156 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 DMBX1Q8NFW5 382 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 OR4D10Q8NGI6 311 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 MRGPRFQ96AM1 343 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
NUP50-205ENST00000419387 ZNF2Q9BSG1 426 aaPredicted RBP7.11□□□□□ -1.27
NUP50-205ENST00000419387 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 ZC4H2Q9NQZ6 224 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 EHFQ9NZC4 300 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 THYN1Q9P016 225 aa7.11□□□□□ -1.27
NUP50-205ENST00000419387 DYNC2H1Q8NCM8 4307 aaKnown RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 TEX50A0A1B0GTY4 177 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 FABP12A6NFH5 140 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 MFSD2BA6NFX1 497 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 PGLYRP1O75594 196 aaPredicted RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 CD74P04233 296 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 CD3DP04234 171 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 PTBP1P26599 531 aaKnown RBP eCLIP7.1□□□□□ -1.27
NUP50-205ENST00000419387 HLA-DMAP28067 261 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 HRH1P35367 487 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 CNPY1Q3B7I2 92 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 RNASE12Q5GAN4 147 aaKnown RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 ZNF57Q68EA5 555 aaPredicted RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 THOC7Q6I9Y2 204 aaKnown RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 LHFPL1Q86WI0 220 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 UXS1Q8NBZ7 420 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 SMIM4Q8WVI0 70 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 FCAMRQ8WWV6 532 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 CACNG8Q8WXS5 425 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 MOB3AQ96BX8 217 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 WDR89Q96FK6 387 aaPredicted RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 QTRT1Q9BXR0 403 aaKnown RBP7.1□□□□□ -1.27
NUP50-205ENST00000419387 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 SRD5A3Q9H8P0 318 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 RYR2Q92736 4967 aa7.1□□□□□ -1.27
NUP50-205ENST00000419387 ANKRD20A5PA0PJZ0 165 aa7.09□□□□□ -1.27
NUP50-205ENST00000419387 TMEM213A2RRL7 107 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms