RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 VDAC2P45880 294 aaPredicted RBP13.84□□□□□ -0.19
PTPRC-206ENST00000413409 DEFA5Q01523 94 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 GUK1Q16774 197 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
PTPRC-206ENST00000413409 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPRC-206ENST00000413409 RHOVQ96L33 236 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 MS4A7Q9GZW8 240 aaPredicted RBP13.84□□□□□ -0.19
PTPRC-206ENST00000413409 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 SLC35D1Q9NTN3 355 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 TRAV1-1A0A0B4J248 108 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 C15orf62A8K5M9 175 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 AGPAT2O15120 278 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 IL6RP08887 468 aaPredicted RBP13.83□□□□□ -0.2
PTPRC-206ENST00000413409 SFTA3P0C7M3 94 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 RAB2AP61019 212 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 OR8G2PQ6IF36 304 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 OR4A47Q6IF82 309 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 SSX9Q7RTT3 188 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 NEU4Q8WWR8 484 aaPredicted RBP13.83□□□□□ -0.2
PTPRC-206ENST00000413409 TNFRSF14Q92956 283 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 NKX6-2Q9C056 277 aaPredicted RBP13.83□□□□□ -0.2
PTPRC-206ENST00000413409 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 KIAA1456Q9P272 454 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 PRNDQ9UKY0 176 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 TCF19Q9Y242 345 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 KPTNQ9Y664 436 aa13.83□□□□□ -0.2
PTPRC-206ENST00000413409 H2AFB1P0C5Y9 115 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 C8orf46Q8TAG6 207 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 OSR1Q8TAX0 266 aaPredicted RBP13.82□□□□□ -0.2
PTPRC-206ENST00000413409 TMEM186Q96B77 213 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 RBMXL1Q96E39 390 aaKnown RBP13.82□□□□□ -0.2
PTPRC-206ENST00000413409 RSG1Q9BU20 258 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 GGACTQ9BVM4 153 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 FBXO7Q9Y3I1 522 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
PTPRC-206ENST00000413409 A0A1W2PPH5 198 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 J3QR06 171 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 SOX15O60248 233 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 SNAPINO95295 136 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 IGHV1-8P0DP01 117 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 COL8A2P25067 703 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 IL3RAP26951 378 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 TMEM41BQ5BJD5 291 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 ATRAIDQ6UW56 229 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 OR5AN1Q8NGI8 311 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 OR13D1Q8NGV5 346 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 OR9G1Q8NH87 305 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 MRPL20Q9BYC9 149 aaKnown RBP13.81□□□□□ -0.2
PTPRC-206ENST00000413409 BET1LQ9NYM9 111 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
PTPRC-206ENST00000413409 H0YJW9 148 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
PTPRC-206ENST00000413409 HSPE1P61604 102 aaKnown RBP13.8□□□□□ -0.2
PTPRC-206ENST00000413409 GUCA2BQ16661 112 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 TMEM177Q53S58 311 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 PDPNQ86YL7 162 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 ESM1Q9NQ30 184 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 MIOXQ9UGB7 285 aa13.8□□□□□ -0.2
PTPRC-206ENST00000413409 TRAV3A0A0B4J244 114 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 C9JQL5 133 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 UPK2O00526 184 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 MBP02144 154 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 HOXA1P49639 335 aaPredicted RBP13.79□□□□□ -0.2
PTPRC-206ENST00000413409 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 OR8B3Q8NGG8 313 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 ST6GALNAC6Q969X2 333 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 NEIL1Q96FI4 390 aaPredicted RBP13.79□□□□□ -0.2
PTPRC-206ENST00000413409 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 NABP2Q9BQ15 211 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
PTPRC-206ENST00000413409 HEYLQ9NQ87 328 aaPredicted RBP13.79□□□□□ -0.2
PTPRC-206ENST00000413409 MPDU1O75352 247 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 FGF7P21781 194 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 RAB13P51153 203 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 ATP5IP56385 69 aaPredicted RBP13.78□□□□□ -0.2
PTPRC-206ENST00000413409 RAB11AP62491 216 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 DLK1P80370 383 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 BTN1A1Q13410 526 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 OR4A5Q8NH83 315 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 EIF5A2Q9GZV4 153 aaKnown RBP13.78□□□□□ -0.2
PTPRC-206ENST00000413409 ENY2Q9NPA8 101 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 FKBP11Q9NYL4 201 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 ZNRD1Q9P1U0 126 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 WDR83OSQ9Y284 106 aa13.78□□□□□ -0.2
PTPRC-206ENST00000413409 PRSS46E5RG02 174 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 LYNX1G3V0Z9 82 aa13.77□□□□□ -0.21
PTPRC-206ENST00000413409 DNASE2O00115 360 aaPredicted RBP13.77□□□□□ -0.21
PTPRC-206ENST00000413409 IFNA10P01566 189 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms