RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 C19orf84I3L1E1 186 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 CYB5BO43169 146 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 IFNA1P01562 189 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 Q8N7P7 452 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 CYB561D1Q8N8Q1 229 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 OR1L8Q8NGR8 309 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 TMEM167AQ8TBQ9 72 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 PATZ1Q9HBE1 687 aaKnown RBP16.76■□□□□ 0.27
USP39-203ENST00000409470 RPS10P5Q9NQ39 176 aa16.76■□□□□ 0.27
USP39-203ENST00000409470 BUB1B-PAK6H3BSN5 160 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
USP39-203ENST00000409470 VMA21Q3ZAQ7 101 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 ARSJQ5FYB0 599 aaPredicted RBP16.75■□□□□ 0.27
USP39-203ENST00000409470 LY6G5BQ8NDX9 201 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 BEND2Q8NDZ0 799 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 MGST2Q99735 147 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 PUS1Q9Y606 427 aaKnown RBP eCLIP16.75■□□□□ 0.27
USP39-203ENST00000409470 SOX15O60248 233 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 IGLV2-23P01705 113 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 OR10W1Q8NGF6 305 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 RAB24Q969Q5 203 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 SSBP3Q9BWW4 388 aaPredicted RBP16.75■□□□□ 0.27
USP39-203ENST00000409470 NDUFA4L2Q9NRX3 87 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 AMMECR1Q9Y4X0 333 aaPredicted RBP16.75■□□□□ 0.27
USP39-203ENST00000409470 INSIG2Q9Y5U4 225 aa16.75■□□□□ 0.27
USP39-203ENST00000409470 SLC25A17O43808 307 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 OPRK1P41145 380 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 AKR1C3P42330 323 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 MOB3BQ86TA1 216 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 PNKDQ8N490 385 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 LGALS7P47929 136 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 TEPPQ6URK8 271 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 RBMS3Q6XE24 437 aaKnown RBP16.74■□□□□ 0.27
USP39-203ENST00000409470 RITA1Q96K30 269 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 GGTLC1Q9BX51 225 aa16.74■□□□□ 0.27
USP39-203ENST00000409470 LOC105371242A0A075B767 164 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 C7orf77A4D0Y5 90 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 GPR6P46095 362 aaPredicted RBP16.73■□□□□ 0.27
USP39-203ENST00000409470 CDC34P49427 236 aaPredicted RBP16.73■□□□□ 0.27
USP39-203ENST00000409470 ATP5IP56385 69 aaPredicted RBP16.73■□□□□ 0.27
USP39-203ENST00000409470 ARF6P62330 175 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 ERHP84090 104 aaKnown RBP16.73■□□□□ 0.27
USP39-203ENST00000409470 C2orf83Q53S99 150 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 IQCF2Q8IXL9 164 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 RPEQ96AT9 228 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 ZNF430Q9H8G1 570 aaPredicted RBP16.73■□□□□ 0.27
USP39-203ENST00000409470 VAX2Q9UIW0 290 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 PXMP4Q9Y6I8 212 aa16.73■□□□□ 0.27
USP39-203ENST00000409470 IGHV1-3A0A0C4DH29 117 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 DEFA4P12838 97 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 RAB31Q13636 194 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 GCSAMLQ5JQS6 135 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 MIC13Q5XKP0 118 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 OR4P4Q8NGL7 312 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 TMPRSS5Q9H3S3 457 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 SMCO4Q9NRQ5 59 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 KCNIP2Q9NS61 270 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 LSM4Q9Y4Z0 139 aaKnown RBP16.72■□□□□ 0.27
USP39-203ENST00000409470 DCHS2Q6V1P9 2916 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 A0A1W2PN81 502 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 NDUFS7O75251 213 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 RNASE2P10153 161 aaKnown RBP16.72■□□□□ 0.27
USP39-203ENST00000409470 CHRNA7P36544 502 aa16.72■□□□□ 0.27
USP39-203ENST00000409470 A0A1W2PPV4 95 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 H3BQ15 152 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 PMS2P11Q13670 270 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 RHEBQ15382 184 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 SSMEM1Q8WWF3 244 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 C1orf159Q96HA4 380 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 SIRT7Q9NRC8 400 aa16.71■□□□□ 0.27
USP39-203ENST00000409470 E7EUB6 86 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 FNDC10F2Z333 226 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 YIF1AO95070 293 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 BSXQ3C1V8 233 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 C10orf55Q5SWW7 151 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 C17orf50Q8WW18 174 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 FAM122AQ96E09 287 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 P2RX4Q99571 388 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 TPSG1Q9NRR2 321 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 A6NNC1 897 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 PSMB3P49720 205 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 NIPSNAP3BQ9BS92 247 aa16.7■□□□□ 0.26
USP39-203ENST00000409470 LOC105371267A0A1B0GV96 52 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 SEC14L6B5MCN3 397 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 TEX45Q8NA69 505 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 INS-IGF2F8WCM5 200 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 M0R1W7 72 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 B2MP61769 119 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 SLC35E3Q7Z769 313 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 MANBALQ9NQG1 85 aa16.69■□□□□ 0.26
USP39-203ENST00000409470 IGFBP2P18065 325 aa16.68■□□□□ 0.26
USP39-203ENST00000409470 EFNA4P52798 201 aa16.68■□□□□ 0.26
USP39-203ENST00000409470 STPG3Q8N7X2 389 aa16.68■□□□□ 0.26
USP39-203ENST00000409470 CGB1A6NKQ9 187 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 ACTL6BO94805 426 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 CNTFRP26992 372 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 MEF2BQ02080 365 aaPredicted RBP16.67■□□□□ 0.26
USP39-203ENST00000409470 TVP23CQ96ET8 276 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 LY6LH3BQJ8 138 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 HTR1DP28221 377 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms