RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 CHEK1O14757 476 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 SSX1Q16384 188 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
CHMP3-203ENST00000409225 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 CYB5BO43169 146 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 P0DMU3 169 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 RPS25P62851 125 aaKnown RBP12.09□□□□□ -0.47
CHMP3-203ENST00000409225 SPHARQ15513 63 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 DHRSXQ8N5I4 330 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 GDPD1Q8N9F7 314 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 PLCXD1Q9NUJ7 323 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 LSM2Q9Y333 95 aaKnown RBP12.09□□□□□ -0.47
CHMP3-203ENST00000409225 V9GY05 133 aa12.09□□□□□ -0.47
CHMP3-203ENST00000409225 IGHV3OR16-13A0A075B7E8 117 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 IGHV3-74A0A0B4J1X5 117 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 TNFSF12O43508 249 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 GNAO1P09471 354 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 CALRP27797 417 aaKnown RBP12.08□□□□□ -0.48
CHMP3-203ENST00000409225 Q56UQ5 140 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 LEMD1Q68G75 181 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-203ENST00000409225 UFD1Q92890 307 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
CHMP3-203ENST00000409225 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
CHMP3-203ENST00000409225 QTRT1Q9BXR0 403 aaKnown RBP12.08□□□□□ -0.48
CHMP3-203ENST00000409225 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-203ENST00000409225 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-203ENST00000409225 UPK2O00526 184 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 AMBPP02760 352 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 DTYMKP23919 212 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 RANBP1P43487 201 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
CHMP3-203ENST00000409225 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 YIF1AO95070 293 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 SERPINE2P07093 398 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 MIFP14174 115 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 DEFB131AP59861 70 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 PAFAH1B2P68402 229 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 WT1-ASQ06250 92 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 AIFM2Q9BRQ8 373 aa12.06□□□□□ -0.48
CHMP3-203ENST00000409225 IGLV2-18A0A075B6J9 118 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 FAM90A2PQ658T7 463 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 MAPKAPK5-AS1Q8N8E1 139 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 ZNF414Q96IQ9 312 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 ATP6V0BQ99437 205 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 NDUFAF3Q9BU61 184 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 CELA1Q9UNI1 258 aa12.05□□□□□ -0.48
CHMP3-203ENST00000409225 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 HERC1Q15751 4861 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 METTL21EPA6NDL7 271 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 PTGES3LE9PB15 166 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 K7EIM0 57 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-203ENST00000409225 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
CHMP3-203ENST00000409225 CTSGP08311 255 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 GIG44P09565 113 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-203ENST00000409225 HSMCR30P0CW71 290 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 TRAPPC2P0DI81 140 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 TRAPPC2BP0DI82 140 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 RAB6AP20340 208 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 TAS2R31P59538 309 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 RELQ04864 619 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-203ENST00000409225 CDNFQ49AH0 187 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 CNIH2Q6PI25 160 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 SECTM1Q8WVN6 248 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 CCL28Q9NRJ3 127 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 F11RQ9Y624 299 aaKnown RBP12.04□□□□□ -0.48
CHMP3-203ENST00000409225 X6R8D5 127 aa12.04□□□□□ -0.48
CHMP3-203ENST00000409225 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 TEX50A0A1B0GTY4 177 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 SULT1C2O00338 296 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 NQO2P16083 231 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 OR10A3P58181 314 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 TRAM1Q15629 374 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
CHMP3-203ENST00000409225 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms