RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 EIF1BO60739 113 aaKnown RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 CBR3O75828 277 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2A4O95047 310 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 NDUFB6O95139 128 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 VAMP5O95183 116 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TTRP02766 147 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 AKAIN1P0CW23 69 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 CCL3P10147 92 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 PRKACBP22694 351 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 HSD11B1P28845 292 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 FAUP35544 74 aaKnown RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 GUCA1AP43080 201 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 MLF1P58340 268 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 LSM6P62312 80 aaKnown RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 ANGPT1Q15389 498 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 LINC00303Q3SY05 128 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC36A1Q7Z2H8 476 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 C9orf62Q8N4C0 152 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 SPICQ8N5J4 248 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM156Q8N614 296 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZIC4Q8N9L1 334 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 Q8N9L7 120 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR1M1Q8NGA1 313 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR4D6Q8NGJ1 314 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR51A2Q8NGJ7 313 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR5D14Q8NGL3 314 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR6N1Q8NGY5 312 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF431Q8TF32 576 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2A7Q96R45 310 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 ALX4Q9H161 411 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM138Q9NPI0 162 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 GLTPQ9NZD2 209 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 RAB22AQ9UL26 194 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 HSPB11Q9Y547 144 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 LHFPL6Q9Y693 200 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 LAMA3Q16787 3333 aa3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 MDC1Q14676 2089 aaKnown RBP3.08□□□□□ -1.92
HMGB3P18-201ENST00000406327 FANCMQ8IYD8 2048 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A0J9YW62 118 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A0U1RQV1 116 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 MEIS3P1A6NDR6 274 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 HSBP1L1C9JCN9 74 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF878C9JN71 531 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 RER1O15258 196 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CREBL2O60519 120 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 MED6O75586 246 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SNAPC5O75971 98 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CD74P04233 296 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CD3DP04234 171 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF688P0C7X2 276 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CCL2P13500 99 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 GTF2F2P13984 249 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CCL1P22362 96 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 APLNRP35414 380 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 UBE2E1P51965 193 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ACTBP60709 375 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SNRPD2P62316 118 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 RPL31P62899 125 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CACNG7P62955 275 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 GRB2P62993 217 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ACTG1P63261 375 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 HIST1H3AP68431 136 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 QRFPP83859 136 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 RBMY1FQ15415 496 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 LGALSLQ3ZCW2 172 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CDNFQ49AH0 187 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 MPV17L2Q567V2 206 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 C10orf128Q5T292 105 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 HIST2H3PS2Q5TEC6 136 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR10K2Q6IF99 312 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 HIST2H3AQ71DI3 136 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF767PQ75MW2 155 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 MDP1Q86V88 176 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ANGPTL5Q86XS5 388 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SAXO1Q8IYX7 474 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC22A24Q8N4F4 322 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM105Q8N8V8 129 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM229BQ8NBD8 167 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR8B12Q8NGG6 310 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR4C16Q8NGL9 310 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 AQP3Q92482 292 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 FLYWCH2Q96CP2 140 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ADAT3Q96EY9 351 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 UBE2E2Q96LR5 201 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 SEC22CQ9BRL7 303 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 RSG1Q9BU20 258 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 HINT2Q9BX68 163 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF436Q9C0F3 470 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 CHST6Q9GZX3 395 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 METTL17Q9H7H0 456 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 DKKL1Q9UK85 242 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 FARSAQ9Y285 508 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 POLR1DQ9Y2S0 133 aa3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 KLF12Q9Y4X4 402 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms