RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 HSD17B10Q99714 261 aaKnown RBP6.85□□□□□ -1.31
NEDD9-203ENST00000397378 PLCXD1Q9NUJ7 323 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 RAB22AQ9UL26 194 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
NEDD9-203ENST00000397378 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
NEDD9-203ENST00000397378 IGLC7A0M8Q6 106 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 NDUFA4O00483 81 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 HRASP01112 189 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 IGLV2-14P01704 120 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 HLA-DQB1P01920 261 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 HLA-GP17693 338 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 CRHBPP24387 322 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 CLDN12P56749 244 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 OR2B8PP59922 312 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 EIF4EBP1Q13541 118 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-203ENST00000397378 ZNF124Q15973 351 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 LAIR2Q6ISS4 152 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 AHSA2Q719I0 299 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 SSX9Q7RTT3 188 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 CYGBQ8WWM9 190 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 BSCL2Q96G97 398 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-203ENST00000397378 SRSF8Q9BRL6 282 aaKnown RBP6.84□□□□□ -1.31
NEDD9-203ENST00000397378 MND1Q9BWT6 205 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 S100A14Q9HCY8 104 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 BET1LQ9NYM9 111 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 AK6Q9Y3D8 172 aaKnown RBP6.84□□□□□ -1.31
NEDD9-203ENST00000397378 ETV7Q9Y603 341 aa6.84□□□□□ -1.31
NEDD9-203ENST00000397378 LRP1BQ9NZR2 4599 aa6.84□□□□□ -1.32
NEDD9-203ENST00000397378 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TRAV10A0A0B4J240 114 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM272A0A1B0GTI8 110 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 RAB27BO00194 218 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 CYB5BO43169 146 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 MRPS14O60783 128 aaKnown RBP6.83□□□□□ -1.32
NEDD9-203ENST00000397378 IFNA10P01566 189 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 CTXN2P0C2S0 81 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 RPA2P15927 270 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 HIST1H1DP16402 221 aaKnown RBP6.83□□□□□ -1.32
NEDD9-203ENST00000397378 GNB3P16520 340 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 GADD45AP24522 165 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TNP2Q05952 138 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 PLA2G7Q13093 441 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM187Q14656 261 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM91Q6ZNR0 172 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 Q6ZR54 194 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 MFSD4AQ8N468 514 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 Q8NAQ8 132 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 OR10R2Q8NGX6 335 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 TCTEX1D2Q8WW35 142 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 AIFM2Q9BRQ8 373 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 RNF126Q9BV68 326 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 NDUFA13Q9P0J0 144 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
NEDD9-203ENST00000397378 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 OR2T8A6NH00 312 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 A6NHS1 94 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 C15orf61A6NNL5 157 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 J3QRK9 145 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 ARL6IP5O75915 188 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 CA1P00915 261 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-203ENST00000397378 FGF2P09038 288 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 DTYMKP23919 212 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 HLA-DMBP28068 263 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 TALDO1P37837 337 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 SPHARQ15513 63 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 TIMM50Q3ZCQ8 353 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 ZNF66Q6ZN08 573 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 Q6ZRM9 215 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 CENPSQ8N2Z9 138 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 DHRSXQ8N5I4 330 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 RNF2Q99496 336 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 CHRDL1Q9BU40 450 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 C20orf24Q9BUV8 137 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 VCX3AQ9NNX9 186 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 MBD2Q9UBB5 411 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 SPATA2Q9UM82 520 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 LSM2Q9Y333 95 aaKnown RBP6.82□□□□□ -1.32
NEDD9-203ENST00000397378 V9GY05 133 aa6.82□□□□□ -1.32
NEDD9-203ENST00000397378 IGHV3OR16-8A0A075B7F1 116 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 J3QL48 77 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 EBAG9O00559 213 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 CHEK1O14757 476 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 RBFOX2O43251 390 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEDD9-203ENST00000397378 ZNF207O43670 478 aaKnown RBP6.81□□□□□ -1.32
NEDD9-203ENST00000397378 AMBPP02760 352 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 NFYAP23511 347 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-203ENST00000397378 TRAM1Q15629 374 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 POU2AF1Q16633 256 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 FAM90A2PQ658T7 463 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 Q6ZTC4 211 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 C8orf59Q8N0T1 100 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-203ENST00000397378 GDPD1Q8N9F7 314 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 BPIFB6Q8NFQ5 453 aa6.81□□□□□ -1.32
NEDD9-203ENST00000397378 TMEM203Q969S6 136 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms