RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 IGKV1-13P0DP09 117 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 RPA2P15927 270 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
SNCA-205ENST00000394991 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 PLET1Q6UQ28 207 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 Q6ZS49 121 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 OR5H6Q8NGV6 325 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 OR4S2Q8NH73 311 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 RARRES2Q99969 163 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 RHBDL2Q9NX52 303 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 DEFB4AO15263 64 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 TGOLN2O43493 480 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 SCGNO76038 276 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 DEFA4P12838 97 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 TCTAP57738 103 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 SSX9Q7RTT3 188 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
SNCA-205ENST00000394991 IGLC7A0M8Q6 106 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 TMEM235A6NFC5 223 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 MPTX1A8MV57 137 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 HLA-DQB1P01920 261 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 CTSDP07339 412 aaPredicted RBP11.58□□□□□ -0.56
SNCA-205ENST00000394991 HLA-GP17693 338 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 NFYAP23511 347 aaPredicted RBP11.58□□□□□ -0.56
SNCA-205ENST00000394991 GNG2P59768 71 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
SNCA-205ENST00000394991 HACD4Q5VWC8 232 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 LAMTOR1Q6IAA8 161 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 GVQW1Q8N7I0 195 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 TCTEX1D2Q8WW35 142 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
SNCA-205ENST00000394991 OR2W1Q9Y3N9 320 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 ETV7Q9Y603 341 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 PKD1P98161 4303 aa11.58□□□□□ -0.56
SNCA-205ENST00000394991 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 IGLL5B9A064 214 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 XRCC3O43542 346 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 PTBP1P26599 531 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNCA-205ENST00000394991 MFAP2P55001 183 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 SCAND1P57086 179 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 OR2B8PP59922 312 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 NUDCD2Q8WVJ2 157 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
SNCA-205ENST00000394991 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 OR2T8A6NH00 312 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 ZNF207O43670 478 aaKnown RBP11.56□□□□□ -0.56
SNCA-205ENST00000394991 RPS19P39019 145 aaKnown RBP11.56□□□□□ -0.56
SNCA-205ENST00000394991 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 SLC25A38Q96DW6 304 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 HSD17B10Q99714 261 aaKnown RBP11.56□□□□□ -0.56
SNCA-205ENST00000394991 FUNDC2Q9BWH2 189 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 TAS2R8Q9NYW2 309 aa11.56□□□□□ -0.56
SNCA-205ENST00000394991 AGRNO00468 2067 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 DTYMKP23919 212 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 MFSD4AQ8N468 514 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 ZNF414Q96IQ9 312 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 CHRDL1Q9BU40 450 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
SNCA-205ENST00000394991 DIABLOQ9NR28 239 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
SNCA-205ENST00000394991 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
SNCA-205ENST00000394991 NDUFA4O00483 81 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 SLC22A5O76082 557 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 HRASP01112 189 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 NCS1P62166 190 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 VN1R17PQ8TDU5 208 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 RNF2Q99496 336 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
SNCA-205ENST00000394991 K7EMT4 169 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 SSX5O60225 188 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 TMEM127O75204 238 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 ADMP35318 185 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 TFPI2P48307 235 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 VBP1P61758 197 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 OR13F1Q8NGS4 319 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
SNCA-205ENST00000394991 HRASLSQ9HDD0 168 aa11.53□□□□□ -0.56
SNCA-205ENST00000394991 A0A0A6YYH2 397 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 A6NJ64 397 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 RTL8CO15255 209 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
SNCA-205ENST00000394991 FCER2P06734 321 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 CTXN2P0C2S0 81 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 PTHLHP12272 177 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 UBE2NLQ5JXB2 153 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 CNIH2Q6PI25 160 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 ZNF66Q6ZN08 573 aa11.52□□□□□ -0.57
SNCA-205ENST00000394991 SAMD12Q8N8I0 201 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms