RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FGF2P09038 288 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 GNRHRP30968 328 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
SMN2-201ENST00000380741 HERV-K104P61576 105 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
SMN2-201ENST00000380741 IFT46Q9NQC8 304 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 EHFQ9NZC4 300 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 COMMD9Q9P000 198 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
SMN2-201ENST00000380741 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 XRCC3O43542 346 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 RLN1P04808 185 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 TRAPPC2P0DI81 140 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 TRAPPC2BP0DI82 140 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 THOC7Q6I9Y2 204 aaKnown RBP12.57□□□□□ -0.4
SMN2-201ENST00000380741 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
SMN2-201ENST00000380741 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 SERPINE2P07093 398 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 F2RP25116 425 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 TGFBR1P36897 503 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 RFX2P48378 723 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 ERVK-16P61578 105 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 HSD17B13Q7Z5P4 300 aaPredicted RBP12.56□□□□□ -0.4
SMN2-201ENST00000380741 BORCS5Q969J3 196 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 MOB3AQ96BX8 217 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SMN2-201ENST00000380741 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 CYB5BO43169 146 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 TMEM127O75204 238 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 MFAP2P55001 183 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 DHRS11Q6UWP2 260 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 S100A16Q96FQ6 103 aaKnown RBP12.55□□□□□ -0.4
SMN2-201ENST00000380741 SPAG8Q99932 426 aaPredicted RBP12.55□□□□□ -0.4
SMN2-201ENST00000380741 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
SMN2-201ENST00000380741 HINT2Q9BX68 163 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
SMN2-201ENST00000380741 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 ANAPC10Q9UM13 185 aa12.55□□□□□ -0.4
SMN2-201ENST00000380741 PGLYRP1O75594 196 aaPredicted RBP12.54□□□□□ -0.4
SMN2-201ENST00000380741 KRASP01116 189 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 PMP2P02689 132 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 UBE2NLQ5JXB2 153 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 TMEM69Q5SWH9 247 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 SLC38A6Q8IZM9 456 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
SMN2-201ENST00000380741 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
SMN2-201ENST00000380741 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
SMN2-201ENST00000380741 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
SMN2-201ENST00000380741 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
SMN2-201ENST00000380741 TSPAN4O14817 238 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 G6PCP35575 357 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 LPAR6P43657 344 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 TAS2R20P59543 309 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 DGCR14Q96DF8 476 aaKnown RBP12.53□□□□□ -0.4
SMN2-201ENST00000380741 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 OR51B2Q9Y5P1 312 aa12.53□□□□□ -0.4
SMN2-201ENST00000380741 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 NDUFA4O00483 81 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 NAT1P18440 290 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 ADMP35318 185 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 APOC4P55056 127 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 TAS2R46P59540 309 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 ODF3L2Q3SX64 289 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 KCTD21Q4G0X4 260 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 ATP6V0BQ99437 205 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
SMN2-201ENST00000380741 DBX1A6NMT0 343 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 K7EIM0 57 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 GPR31O00270 319 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
SMN2-201ENST00000380741 SNAPC5O75971 98 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
SMN2-201ENST00000380741 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMN2-201ENST00000380741 PMS2P11Q13670 270 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 DEFB135Q30KP9 77 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 LAMTOR1Q6IAA8 161 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 Q6ZWC4 215 aa12.51□□□□□ -0.41
SMN2-201ENST00000380741 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms