RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NDUFB8O95169 186 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 CSN3P07498 182 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 ARL3P36405 182 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 LCN12Q6JVE5 192 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 IL34Q6ZMJ4 242 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 LHFPL1Q86WI0 220 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 GDPD1Q8N9F7 314 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 TMEM229BQ8NBD8 167 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 LSM10Q969L4 123 aaKnown RBP12.82□□□□□ -0.36
HMGN4-201ENST00000377575 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 FKBP11Q9NYL4 201 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 OR51B2Q9Y5P1 312 aa12.82□□□□□ -0.36
HMGN4-201ENST00000377575 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 CTDSP2O14595 271 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
HMGN4-201ENST00000377575 RND3P61587 244 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 CLEC19AQ6UXS0 136 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 Q8N402 240 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 OR10W1Q8NGF6 305 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 OR5B3Q8NH48 314 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
HMGN4-201ENST00000377575 C15orf61A6NNL5 157 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 LGALS9O00182 355 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 RAB3DO95716 219 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 CD74P04233 296 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 SERPINE2P07093 398 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 PPP5CP53041 499 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 PIGPP57054 158 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 IL18Q14116 193 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 H2BFWTQ7Z2G1 175 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 SMIM4Q8WVI0 70 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 DIRAS2Q96HU8 199 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 TMEM56Q96MV1 263 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 C6orf62Q9GZU0 229 aaPredicted RBP12.8□□□□□ -0.36
HMGN4-201ENST00000377575 TMEM14BQ9NUH8 114 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 S4R3C0 116 aa12.8□□□□□ -0.36
HMGN4-201ENST00000377575 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 H3BMQ9 156 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 MECP2P51608 486 aaKnown RBP12.79□□□□□ -0.36
HMGN4-201ENST00000377575 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 MEF2DQ14814 521 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 STEAP1BQ6NZ63 245 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 SGPP2Q8IWX5 399 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 CCDC71LQ8N9Z2 235 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 OR4D10Q8NGI6 311 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 DYNLRB2Q8TF09 96 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 ISOC1Q96CN7 298 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 ASCL2Q99929 193 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 U3KQK5 164 aa12.79□□□□□ -0.36
HMGN4-201ENST00000377575 CTDSPLO15194 276 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 OR2C1O95371 312 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
HMGN4-201ENST00000377575 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 PI3P19957 117 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 FAM106AQ4KMX7 169 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 OR1L6Q8NGR2 347 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 TERB2Q8NHR7 220 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 VN1R17PQ8TDU5 208 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
HMGN4-201ENST00000377575 F11RQ9Y624 299 aaKnown RBP12.78□□□□□ -0.36
HMGN4-201ENST00000377575 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 ATG12O94817 140 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 IGKV1-39P01597 117 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 IGKV1D-39P04432 117 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 GPR183P32249 361 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 OR13C8Q8NGS7 320 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.37
HMGN4-201ENST00000377575 C3orf85A0A1B0GTC6 90 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 A8MWP6 167 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 CLEC3BP05452 202 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 IGHV4-30-4P0DP06 118 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 AKR1C2P52895 323 aa12.76□□□□□ -0.37
HMGN4-201ENST00000377575 SLIRPQ9GZT3 109 aaKnown RBP12.76□□□□□ -0.37
HMGN4-201ENST00000377575 TECRQ9NZ01 308 aaKnown RBP12.76□□□□□ -0.37
HMGN4-201ENST00000377575 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
HMGN4-201ENST00000377575 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
HMGN4-201ENST00000377575 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
HMGN4-201ENST00000377575 DBX1A6NMT0 343 aa12.75□□□□□ -0.37
HMGN4-201ENST00000377575 CTSDP07339 412 aaPredicted RBP12.75□□□□□ -0.37
HMGN4-201ENST00000377575 FOLR2P14207 255 aa12.75□□□□□ -0.37
HMGN4-201ENST00000377575 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms