RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 DCTN5Q9BTE1 182 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 PSG11Q9UQ72 335 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
SF1-205ENST00000377394 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 A0A1W2PS18 150 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 ZNF83P51522 516 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 Q0VG73 95 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 FOXF2Q12947 444 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
SF1-205ENST00000377394 FZR1Q9UM11 496 aa11.45□□□□□ -0.58
SF1-205ENST00000377394 DPRXA6NFQ7 191 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 PROP1O75360 226 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
SF1-205ENST00000377394 IGHG3P01860 377 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 CDC34P49427 236 aaPredicted RBP11.44□□□□□ -0.58
SF1-205ENST00000377394 SLC35B1P78383 322 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 CD177Q8N6Q3 437 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 K7EN84 100 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
SF1-205ENST00000377394 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 TNFSF4P23510 183 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
SF1-205ENST00000377394 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
SF1-205ENST00000377394 PDE6DO43924 150 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 PSG1P11464 419 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 MORN2Q502X0 79 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 NIT1Q86X76 327 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 CNEP1R1Q8N9A8 125 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 PTPRBP23467 1997 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 SPENQ96T58 3664 aaKnown RBP11.43□□□□□ -0.58
SF1-205ENST00000377394 C17orf112F2Z3M2 114 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 CECR9P0C854 216 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 FABP6P51161 128 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 HTD2P86397 168 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 OCIAD2Q56VL3 154 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 IL36BQ9NZH7 164 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 WDR83OSQ9Y284 106 aa11.43□□□□□ -0.58
SF1-205ENST00000377394 NTF3P20783 257 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 DUTP33316 252 aaKnown RBP11.42□□□□□ -0.58
SF1-205ENST00000377394 LGALS4P56470 323 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 OR8I2Q8N0Y5 310 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 PRR14LQ5THK1 2151 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 RELBQ01201 579 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 C9orf106Q8NAJ2 232 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 PRRC2CQ9Y520 2896 aaKnown RBP11.42□□□□□ -0.58
SF1-205ENST00000377394 SPINT2O43291 252 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 ADH4P08319 380 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 PRRX1P54821 245 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 TRIP6Q15654 476 aaKnown RBP11.42□□□□□ -0.58
SF1-205ENST00000377394 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
SF1-205ENST00000377394 Q8TCH9 128 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
SF1-205ENST00000377394 MRPS16Q9Y3D3 137 aaKnown RBP11.42□□□□□ -0.58
SF1-205ENST00000377394 IGHV2-26A0A0B4J1V2 119 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 IGLC7A0M8Q6 106 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 MMP23AO75900 390 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 CD1BP29016 333 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 HOXC12P31275 282 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 EDDM3BP56851 147 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 LTC4SQ16873 150 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 OR4F17Q8NGA8 305 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 CA2P00918 260 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 PRDX2P32119 198 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
SF1-205ENST00000377394 EDDM3AQ14507 147 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 TMEM249Q2WGJ8 235 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 LRRC29Q8WV35 223 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
SF1-205ENST00000377394 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 GPR12P47775 334 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
SF1-205ENST00000377394 TRAT1Q6PIZ9 186 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 MMD2Q8IY49 270 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 RAB1CQ92928 201 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 RRHO14718 337 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 FCGR3BO75015 233 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
SF1-205ENST00000377394 ZNF718Q3SXZ3 478 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 DEFB123Q8N688 67 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
SF1-205ENST00000377394 LOC400499M0QZD8 3231 aa11.39□□□□□ -0.59
SF1-205ENST00000377394 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
SF1-205ENST00000377394 IGHV1-69-2A0A0G2JMI3 117 aa11.39□□□□□ -0.59
SF1-205ENST00000377394 ARL14EPLP0DKL9 152 aa11.39□□□□□ -0.59
SF1-205ENST00000377394 SRIP30626 198 aa11.39□□□□□ -0.59
SF1-205ENST00000377394 TCL1AP56279 114 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms