RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TMEM14EPQ6UXP3 125 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 Q6ZPA2 131 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM217Q8N7C4 229 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 IL1F10Q8WWZ1 152 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 TAF15Q92804 592 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL5A1-202ENST00000371820 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 YPEL4Q96NS1 127 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 CCL13Q99616 98 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM147Q9BVK8 224 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 HES4Q9HCC6 221 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 KCNIP2Q9NS61 270 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 GAR1Q9NY12 217 aaKnown RBP8.46□□□□□ -1.06
COL5A1-202ENST00000371820 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 OR14J1Q9UGF5 321 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 NAT8Q9UHE5 227 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.06
COL5A1-202ENST00000371820 GAB2Q9UQC2 676 aa8.46□□□□□ -1.06
COL5A1-202ENST00000371820 IGHV3OR16-10A0A075B7F0 116 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 SPINT2O43291 252 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ARG1P05089 322 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 FABP1P07148 127 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 KIR2DS2P43631 304 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 CCL20P78556 96 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 HOXA4Q00056 320 aaPredicted RBP8.45□□□□□ -1.06
COL5A1-202ENST00000371820 TNFRSF9Q07011 255 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 SLC38A11Q08AI6 406 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ELOBQ15370 118 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM241Q24JQ0 296 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 SMIM21Q3B7S5 101 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ACOT6Q3I5F7 207 aaPredicted RBP8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF788Q6ZQV5 615 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 BCL6BQ8N143 479 aaPredicted RBP8.45□□□□□ -1.06
COL5A1-202ENST00000371820 KIR3DL3Q8N743 410 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 C20orf24Q9BUV8 137 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 FGF23Q9GZV9 251 aaPredicted RBP8.45□□□□□ -1.06
COL5A1-202ENST00000371820 SIRPDQ9H106 197 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 RPRMQ9NS64 109 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 GNG13Q9P2W3 67 aa8.45□□□□□ -1.06
COL5A1-202ENST00000371820 ARHGAP32A7KAX9 2087 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 A0A1W2PPE2 198 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF727A8MUV8 499 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ITGB1BP1O14713 200 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 PPP1R2P9O14990 202 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 GATCO43716 136 aaKnown RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF737O75373 536 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM50AO95807 157 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 HAND1O96004 215 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 GABRA2P47869 451 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ATP5IP56385 69 aaPredicted RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ARF6P62330 175 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 RAB11AP62491 216 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM30BQ3MIR4 351 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF585BQ52M93 769 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 H2BFWTQ7Z2G1 175 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 DRAM1Q8N682 238 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 CYB561D1Q8N8Q1 229 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 H1FXQ92522 213 aaKnown RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 LHX4Q969G2 390 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 ZNF48Q96MX3 618 aaPredicted RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 TBX15Q96SF7 602 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 DCTN5Q9BTE1 182 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 NIT2Q9NQR4 276 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 SLC25A10Q9UBX3 287 aaPredicted RBP8.44□□□□□ -1.06
COL5A1-202ENST00000371820 DOCK11Q5JSL3 2073 aa8.44□□□□□ -1.06
COL5A1-202ENST00000371820 TRBV23-1A0A0A0MS06 115 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 IGHV1-69DA0A0B4J2H0 117 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 SIRPB1O00241 398 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 HSPB6O14558 160 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 TNFSF12O43508 249 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 IGHV1-69P01742 117 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 NQO2P16083 231 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 NDUFB7P17568 137 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 RPL19P84098 196 aaKnown RBP8.43□□□□□ -1.06
COL5A1-202ENST00000371820 PRR31Q5SQ13 230 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 BRD3OSQ6XYD6 125 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 ODF3L1Q8IXM7 274 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 LY6G5BQ8NDX9 201 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 C8orf46Q8TAG6 207 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 CORO2AQ92828 525 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 RCC1LQ96I51 464 aaKnown RBP8.43□□□□□ -1.06
COL5A1-202ENST00000371820 FAM210BQ96KR6 192 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 GAFA1Q96PS6 74 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 OR4C12Q96R67 309 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 RBKSQ9H477 322 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 PRDM13Q9H4Q3 707 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 ONECUT1Q9UBC0 465 aa8.43□□□□□ -1.06
COL5A1-202ENST00000371820 PITPNC1Q9UKF7 332 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms