RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CD160O95971 181 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 GP6Q9HCN6 339 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 EGR2P11161 476 aaPredicted RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 SRD5A1P18405 259 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 TNFRSF4P43489 277 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 SNRPD3P62318 126 aaKnown RBP5.32□□□□□ -1.56
VCAN-203ENST00000343200 SRSF1Q07955 248 aaKnown RBP eCLIP5.32□□□□□ -1.56
VCAN-203ENST00000343200 C1orf174Q8IYL3 243 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 OR11H4Q8NGC9 324 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 SLC25A40Q8TBP6 338 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 PPP1R3EQ9H7J1 279 aa5.32□□□□□ -1.56
VCAN-203ENST00000343200 IGHV2-70P01814 119 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 IFI27P40305 119 aaPredicted RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 HMGA2P52926 109 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 RPL8P62917 257 aaKnown RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 LOXL4Q96JB6 756 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 SSBP3Q9BWW4 388 aaPredicted RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 K7EP13 123 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 THY1P04216 161 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 CD1AP06126 327 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ADMP35318 185 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 RBM3P98179 157 aaKnown RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 FAM53BQ14153 422 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ZNF146Q15072 292 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 SPXQ9BT56 116 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 NRSN2Q9GZP1 204 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ID4P47928 161 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ATP23Q9Y6H3 246 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 CLDN14O95500 239 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 RPS27P42677 84 aaKnown RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 EFNB2P52799 333 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 RHOGP84095 191 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 KLF17Q5JT82 389 aaPredicted RBP5.31□□□□□ -1.56
VCAN-203ENST00000343200 SPEM1Q8N4L4 309 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 C1QTNF4Q9BXJ3 329 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 TWSG1Q9GZX9 223 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 GPX1P07203 203 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ZNF688P0C7X2 276 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 GZMBP10144 247 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 CD38P28907 300 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 GFRA1P56159 465 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 ZNF750Q32MQ0 723 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 PIGYQ3MUY2 71 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 SMIM20Q8N5G0 67 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 GNRHR2Q96P88 292 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 A0A087X0K7 114 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 FSTP19883 344 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 LOXL3P58215 753 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 NOGQ13253 232 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 MVB12AQ96EY5 273 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 MPC1Q9Y5U8 109 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 A0A0U1RQV5 110 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 CD5LO43866 347 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 C5orf47Q569G3 176 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 SFXN3Q9BWM7 321 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 SDF2L1Q9HCN8 221 aa5.31□□□□□ -1.56
VCAN-203ENST00000343200 F2RL2O00254 374 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 GFI1BQ5VTD9 330 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 KIRREL2Q6UWL6 708 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 FBLIM1Q8WUP2 373 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 NCR2O95944 276 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 PNLIPP16233 465 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 CTLA4P16410 223 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 IFITM3Q01628 133 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 GUSBP1Q15486 140 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 KCNMB1Q16558 191 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 MIC13Q5XKP0 118 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 BCL6BQ8N143 479 aaPredicted RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 C8orf88P0DMB2 117 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 COX5BP10606 129 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 CRYBB3P26998 211 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 LSM6P62312 80 aaKnown RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 RBMY1FQ15415 496 aaKnown RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 FBXW9Q5XUX1 488 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 NPIPB4C9JG80 1138 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 ELNP15502 786 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 UCP3P55916 312 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 DUSP2Q05923 314 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 SLAQ13239 276 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 DEFB133Q30KQ1 61 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 ZDHHC16Q969W1 377 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 RNF186Q9NXI6 227 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 COL16A1Q07092 1604 aaPredicted RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 DMRTC1Q5HYR2 192 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 NABP1Q96AH0 204 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 CEACAM4O75871 244 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 BAHD1Q8TBE0 780 aaPredicted RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 RPRMQ9NS64 109 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 TMEM202A6NGA9 273 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 PRRT4C9JH25 899 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 TOMM40O96008 361 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 SSTR5P35346 364 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 MRPS11P82912 194 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms