RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 LNP1A1A4G5 178 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 CSN3P07498 182 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 DUTP33316 252 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 FOXF2Q12947 444 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 DEFB109BQ30KR1 87 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 Q6ZT83 130 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 WFDC8Q8IUA0 241 aa10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 AMMECR1Q9Y4X0 333 aaPredicted RBP10.64□□□□□ -0.71
DNMT3A-202ENST00000321117 EFNB3Q15768 340 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 ITLN1Q8WWA0 313 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 ARSJQ5FYB0 599 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 OR4A47Q6IF82 309 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 MBNL3Q9NUK0 354 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 FOXJ2Q9P0K8 574 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 TYMSP04818 313 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 IGHV1-2P23083 117 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 C1orf174Q8IYL3 243 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 RAB1CQ92928 201 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 C19orf24Q9BVV8 132 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 DNAJC4Q9NNZ3 241 aa10.63□□□□□ -0.71
DNMT3A-202ENST00000321117 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 NDUFB3O43676 98 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 IL18BPO95998 194 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 PLAUP00749 431 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 LINC00205P59089 165 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 WDR82Q6UXN9 313 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 FAM19A2Q8N3H0 131 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 A6NNC1 897 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 REG1BP48304 166 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 PERPQ96FX8 193 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 CCL13Q99616 98 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 LINC00473A8K010 186 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 COL8A1P27658 744 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF137PP52743 207 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 LRRC10Q5BKY1 277 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 WASHC3Q9Y3C0 194 aa10.62□□□□□ -0.71
DNMT3A-202ENST00000321117 A8MWL6 223 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 CECR9P0C854 216 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 GATA2P23769 480 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 OPN3Q9H1Y3 402 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 CHODLQ9H9P2 273 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 NUP210LQ5VU65 1888 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 ARHGAP21Q5T5U3 1957 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 MORN2Q502X0 79 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF355PQ9NSJ1 428 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 NGBQ9NPG2 151 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 CADP27708 2225 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 DLL1O00548 723 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 RBFOX2O43251 390 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■□□□ 12.3
DNMT3A-202ENST00000321117 CSN1S1P47710 185 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 RPL8P62917 257 aaKnown RBP10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 ATP1A1-AS1Q5TC04 95 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 MGST2Q99735 147 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
DNMT3A-202ENST00000321117 EP300Q09472 2414 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 LY6G6EA0A0G2JKS1 128 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 DLEU1O43261 78 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 SELENOTP62341 195 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 U3KQA8 63 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 YPEL1O60688 119 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 RBP4P02753 201 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 TFPI2P48307 235 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 MOB3BQ86TA1 216 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 YPEL2Q96QA6 119 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 FGF23Q9GZV9 251 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF430Q9H8G1 570 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 SEPSECSQ9HD40 501 aaKnown RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 ZNF503-AS2A6NEH8 195 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 SPATA31B1PQ5VZV4 182 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 TMEM144Q7Z5S9 345 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 OR2T6Q8NHC8 308 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 COQ2Q96H96 371 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 MRPL32Q9BYC8 188 aaKnown RBP10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
DNMT3A-202ENST00000321117 PGPA6NDG6 321 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 C15orf61A6NNL5 157 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 ACP1P24666 158 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
DNMT3A-202ENST00000321117 LYZP61626 148 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms