RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 LINC01548A6NM66 108 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 UPK2O00526 184 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 CA2P00918 260 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 PVALBP20472 110 aaPredicted RBP17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 SSBP2P81877 361 aaPredicted RBP17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 OPCMLQ14982 345 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 PRSS8Q16651 343 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 TNCP24821 2201 aa17.76■□□□□ 0.43
CCDC85B-201ENST00000312579 SSSCA1O60232 199 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 OPN1MWP04001 364 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 OPN1MW2P0DN77 364 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 OPN1MW3P0DN78 364 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 RELBQ01201 579 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 C10orf55Q5SWW7 151 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 KCNRGQ8N5I3 272 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 VSTM2AQ8TAG5 236 aa17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.75■□□□□ 0.43
CCDC85B-201ENST00000312579 M0QZK8 103 aa17.74■□□□□ 0.43
CCDC85B-201ENST00000312579 KCNAB3O43448 404 aa17.74■□□□□ 0.43
CCDC85B-201ENST00000312579 RBMXL2O75526 392 aaKnown RBP17.74■□□□□ 0.43
CCDC85B-201ENST00000312579 VAMP2P63027 116 aa17.74■□□□□ 0.43
CCDC85B-201ENST00000312579 GON7Q9BXV9 100 aa17.74■□□□□ 0.43
CCDC85B-201ENST00000312579 IGHV7-81A0A0B4J1V7 117 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 FAM90A26D6RGX4 464 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 NDPQ00604 133 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 TNXAQ16473 311 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 AQP10Q96PS8 301 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 SLA2Q9H6Q3 261 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 ZC4H2Q9NQZ6 224 aa17.73■□□□□ 0.43
CCDC85B-201ENST00000312579 TRIM77I1YAP6 450 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 HLA-DRB1P01911 266 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 P2RY1P47900 373 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 RPL8P62917 257 aaKnown RBP17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 CX3CL1P78423 397 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 TMEM95Q3KNT9 176 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 PRIMA1Q86XR5 153 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 OR4A16Q8NH70 328 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 OR4A5Q8NH83 315 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 QTRT1Q9BXR0 403 aaKnown RBP17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 NPFFR1Q9GZQ6 430 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 ZNF702PQ9H963 129 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 KANTRA0A1W2PQU2 76 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 MSGN1A6NI15 193 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 E7EUB6 86 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 RPL12P30050 165 aaKnown RBP17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 IFITM2Q01629 132 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 MMD2Q8IY49 270 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 FAM103A1Q9BTL3 118 aaKnown RBP17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 C11orf1Q9H5F2 150 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 FBXO7Q9Y3I1 522 aa17.72■□□□□ 0.43
CCDC85B-201ENST00000312579 BCL2L11O43521 198 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 SYNGR2O43760 224 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 MED6O75586 246 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 CNIH1O95406 144 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 HKR1P10072 659 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 FXYD3Q14802 87 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 Q6ZSV7 163 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 RAB40CQ96S21 281 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 HSPB7Q9UBY9 170 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 C2CD3Q4AC94 2353 aa17.71■□□□□ 0.43
CCDC85B-201ENST00000312579 A0A1B0GW64 132 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 C15orf61A6NNL5 157 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 CRYBA1P05813 215 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 APELAP0DMC3 54 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 TNFRSF9Q07011 255 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 SPINK9Q5DT21 86 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 ZNF562Q6V9R5 426 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 LINC00527Q9UJ94 153 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 OR51B2Q9Y5P1 312 aa17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 TET2Q6N021 2002 aaPredicted RBP17.7■□□□□ 0.42
CCDC85B-201ENST00000312579 TEX50A0A1B0GTY4 177 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 ACTL6BO94805 426 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 COMPP49747 757 aaPredicted RBP17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 ABHD5Q8WTS1 349 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 ARPC5LQ9BPX5 153 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 PRSS22Q9GZN4 317 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 RBKSQ9H477 322 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 PARP11Q9NR21 331 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 TMEM14BQ9NUH8 114 aa17.69■□□□□ 0.42
CCDC85B-201ENST00000312579 CGB1A6NKQ9 187 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 ATP6V0E1O15342 81 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 IAPPP10997 89 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 CAV2P51636 162 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 RPL23AP62750 156 aaKnown RBP17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 OR2C3Q8N628 320 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 ARPC1AQ92747 370 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 PRNDQ9UKY0 176 aa17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 FOXA2Q9Y261 457 aaPredicted RBP17.68■□□□□ 0.42
CCDC85B-201ENST00000312579 IGHG2P01859 326 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 EGR2P11161 476 aaPredicted RBP17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 SLC35E3Q7Z769 313 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 SRSF12Q8WXF0 261 aaKnown RBP17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 NOL4LQ96MY1 436 aaPredicted RBP17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 HINT2Q9BX68 163 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 COMMD5Q9GZQ3 224 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 LYRM2Q9NU23 88 aaPredicted RBP17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 CACFD1Q9UGQ2 172 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 FAM24AA6NFZ4 105 aa17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 RPL27AP46776 148 aaKnown RBP17.67■□□□□ 0.42
CCDC85B-201ENST00000312579 RIPPLY3P57055 190 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms