RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SELLP14151 372 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 ASPHD2Q6ICH7 369 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 RPP21Q9H633 154 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SLC25A10Q9UBX3 287 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 K7EQS6 105 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SRP19P09132 144 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 CEACAM1P13688 526 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 HLA-DMBP28068 263 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 TDGF1P3P51864 188 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 C19orf48Q6RUI8 117 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 LRP10Q7Z4F1 713 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GAPTQ8N292 157 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 DUSP15Q9H1R2 295 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GLI3P10071 1580 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 COLCA2A8K830 154 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SERF1AO75920 110 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 HOXC4P09017 264 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 IFITM3Q01628 133 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 CLEC2AQ6UVW9 174 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM108Q6UXF1 575 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 WDR54Q9H977 334 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 AKAP13Q12802 2813 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 TRAV8-6A0A0B4J262 113 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FAM181BA6NEQ2 426 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 LILRA5A6NI73 299 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 IL2RAP01589 272 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 LYZP61626 148 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SUMO2P61956 95 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 BIVMQ86UB2 503 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 OR5AN1Q8NGI8 311 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FAM222BQ8WU58 562 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FBLN5Q9UBX5 448 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV23OR9-2A0A075B6M9 112 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 Q0VG73 95 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 IL11RAQ14626 422 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 PPIAL4EA0A075B759 164 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 IGKCP01834 107 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 PPIAL4FP0DN26 164 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FUT5Q11128 374 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM170BQ5T4T1 132 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 LYG1Q8N1E2 194 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 ATP6V0E2Q8NHE4 81 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 BAHD1Q8TBE0 780 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF385AQ96PM9 386 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 WFDC1Q9HC57 220 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 CLEC1BQ9P126 229 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 PPIAL4AQ9Y536 164 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 PCSK5Q92824 1860 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV20OR9-2A0A075B6H5 130 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TIMP3P35625 211 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF788Q6ZQV5 615 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 OR5P3Q8WZ94 311 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 H1FXQ92522 213 aaKnown RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NRSN2Q9GZP1 204 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 AMBPP02760 352 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 PF4V1P10720 104 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 EBLN2Q6P2I7 272 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 Q6ZSR6 202 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 Q6ZVH6 145 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 FRRS1LQ9P0K9 344 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 RPL36A-HNRNPH2H7BZ11 118 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 PRNTQ86SH4 94 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF831Q5JPB2 1677 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 LOC389332A0A1B0GUA5 103 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TCRBV5S1A1TA0A578 114 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 IQCF6A8MYZ5 107 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 FCGR3BO75015 233 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 CA6P23280 308 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 ANOS1P23352 680 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 LAGE3Q14657 143 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NR0B2Q15466 257 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 RRN3P1Q2M238 152 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 MAFAQ8NHW3 353 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 KLF16Q9BXK1 252 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 RTN4RQ9BZR6 473 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 KIR3DS1Q14943 382 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NRN1LQ496H8 165 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF740Q8NDX6 193 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 SIGLEC12Q96PQ1 595 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NPCDR1Q9BY65 106 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 IGHV2-70DA0A0C4DH43 119 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PRF3 423 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PRM7 423 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 TIMM23O14925 209 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 GLI4P10075 376 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 HOXD9P28356 352 aaPredicted RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NOVP48745 357 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 GUCA2AQ02747 115 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 GPR146Q96CH1 333 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 CXXC4Q9H2H0 198 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 F11RQ9Y624 299 aaKnown RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 VWC2LB2RUY7 222 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 SCRG1O75711 98 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 NXPH3O95157 252 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 CCL23P55773 120 aa4.16□□□□□ -1.74
CSMD3-201ENST00000297405 RPL32P62910 135 aaKnown RBP4.16□□□□□ -1.74
CSMD3-201ENST00000297405 C16orf52Q8NHV5 167 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms