RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 IGHV2-5P01817 119 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 TUSC1Q2TAM9 212 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 SUN5Q8TC36 379 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 REG4Q9BYZ8 158 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 RPRMQ9NS64 109 aa10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 SRRM4A7MD48 611 aaKnown RBP10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 SNRNP70P08621 437 aaKnown RBP10.68□□□□□ -0.7
PPP1CB-201ENST00000296122 TSPAN9O75954 239 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 SFTA3P0C7M3 94 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 SP5Q6BEB4 398 aaPredicted RBP10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 NPCDR1Q9BY65 106 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 C1RLQ9NZP8 487 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 NDUFS8O00217 210 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 MYOD1P15172 320 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 M6PRP20645 277 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 VDAC2P45880 294 aaPredicted RBP10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 ZNF137PP52743 207 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 OR2T10Q8NGZ9 312 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 FBXL15Q9H469 300 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 IGLV1-47P01700 117 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 IGFBP2P18065 325 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 PSMB3P49720 205 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 OR4P4Q8NGL7 312 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 NANPQ8TBE9 248 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 RFNGQ9Y644 331 aa10.67□□□□□ -0.7
PPP1CB-201ENST00000296122 RBFOX3A6NFN3 312 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 FCN3O75636 299 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 IGKV1D-33P01593 117 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 IGKV1-33P01594 117 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 B2MP61769 119 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 C1orf122Q6ZSJ8 110 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 LY6G5BQ8NDX9 201 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 ST6GALNAC6Q969X2 333 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 RNF5Q99942 180 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 ZNF462Q96JM2 2506 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 HMGB3O15347 200 aaKnown RBP10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 PPP1R27Q86WC6 154 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 KIR3DL3Q8N743 410 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 PARD6GQ9BYG4 376 aaPredicted RBP10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 SCO1O75880 301 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 MOSP00540 346 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 MINOS1Q5TGZ0 78 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 MINOS1-NBL1R4GNA1 71 aa10.66□□□□□ -0.7
PPP1CB-201ENST00000296122 TNCP24821 2201 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 DOPEY1Q5JWR5 2465 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 IGHV2-70DA0A0C4DH43 119 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 OOSP1A8MZH6 123 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 FAM157AC9JC47 383 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 FAM106CPP0CH98 169 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 APELAP0DMC3 54 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 MAS1LP35410 378 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 ZNF295-AS1Q8N0V1 137 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 PUSL1Q8N0Z8 303 aaKnown RBP10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 HCFC1P51610 2035 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 DSCR9P59020 149 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 PSG5Q15238 335 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 OR10W1Q8NGF6 305 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 BBC3Q96PG8 261 aaPredicted RBP10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
PPP1CB-201ENST00000296122 PRSS8Q16651 343 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 HCP5Q6MZN7 132 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 OR11H6Q8NGC7 330 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 RCC1LQ96I51 464 aaKnown RBP10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 SEC11CQ9BY50 192 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 TSPAN4O14817 238 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 TMEM11P17152 192 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 C11orf42Q8N5U0 333 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 NKX6-2Q9C056 277 aaPredicted RBP10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 NBR2O15453 112 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 TAGLN2P37802 199 aaKnown RBP10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 AARDQ4LEZ3 155 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 PUS1Q9Y606 427 aaKnown RBP eCLIP10.64□□□□□ -0.71
PPP1CB-201ENST00000296122 CORTO00230 105 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 REG1AP05451 166 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 RHOBP62745 196 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 CST9LP1Q5W188 147 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 MIC13Q5XKP0 118 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 SLC16A13Q7RTY0 426 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 SIGLEC9Q9Y336 463 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 CD24P25063 80 aa10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 COMPP49747 757 aaPredicted RBP10.63□□□□□ -0.71
PPP1CB-201ENST00000296122 LHFPL4Q7Z7J7 247 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms