RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 NAA38Q9BRA0 125 aaKnown RBP13.2□□□□□ -0.3
USP43-201ENST00000285199 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 CTSSP25774 331 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 LTBRP36941 435 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 IL15RAQ13261 267 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 C2orf88Q9BSF0 95 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 PLXNB3Q9ULL4 1909 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 IGKV1-6A0A0C4DH72 117 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 MT-ND6P03923 174 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 RND2P52198 227 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 NPIPB3Q92617 1050 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 C1QTNF5Q9BXJ0 243 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 PCED1AQ9H1Q7 454 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 FADS6Q8N9I5 356 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 EGLN1Q9GZT9 426 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 SAP30LQ9HAJ7 183 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 ISLRO14498 428 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 VMA21Q3ZAQ7 101 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 CLEC5AQ9NY25 188 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 MPDU1O75352 247 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 MOSP00540 346 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 HSPE1P61604 102 aaKnown RBP13.19□□□□□ -0.3
USP43-201ENST00000285199 RPL8P62917 257 aaKnown RBP13.19□□□□□ -0.3
USP43-201ENST00000285199 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 ZNF841Q6ZN19 808 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 LINC00596Q86U02 117 aa13.19□□□□□ -0.3
USP43-201ENST00000285199 K7ERU9 68 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 UMODP07911 640 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 PTGDSP41222 190 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 PSG7Q13046 419 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 C5orf17Q8NAS9 161 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 ITLN1Q8WWA0 313 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 ZFHX2Q9C0A1 2572 aaPredicted RBP13.18□□□□□ -0.3
USP43-201ENST00000285199 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 CDKN1AP38936 164 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 RSPO1Q2MKA7 263 aaPredicted RBP13.18□□□□□ -0.3
USP43-201ENST00000285199 DIRC2Q96SL1 478 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 CFHR5Q9BXR6 569 aa13.18□□□□□ -0.3
USP43-201ENST00000285199 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP43-201ENST00000285199 PSPNO60542 156 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 C1orf194Q5T5A4 169 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 SLC25A34Q6PIV7 304 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 PRNDQ9UKY0 176 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 ZNF716A6NP11 495 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 PPIHO43447 177 aaKnown RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 MYOD1P15172 320 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 PAX9P55771 341 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 PKIBQ9C010 78 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 ASCL3Q9NQ33 180 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 PCSK4Q6UW60 755 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 SAP25Q8TEE9 199 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 AMY1AP04745 511 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 C8orf88P0DMB2 117 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 SELLP14151 372 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 SLC25A53Q5H9E4 307 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 Q6ZVH6 145 aa13.17□□□□□ -0.3
USP43-201ENST00000285199 EAF1Q96JC9 268 aaPredicted RBP13.17□□□□□ -0.3
USP43-201ENST00000285199 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 NDUFB3O43676 98 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 FOXH1O75593 365 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 ALKBH7Q9BT30 221 aaPredicted RBP13.16□□□□□ -0.3
USP43-201ENST00000285199 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 COL4A3Q01955 1670 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 SLC25A17O43808 307 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 CFPP27918 469 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
USP43-201ENST00000285199 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 PPP1R32Q7Z5V6 425 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 SAXO1Q8IYX7 474 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 TMEM242Q9NWH2 141 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 CALYQ9NYX4 217 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 PIEZO2Q9H5I5 2752 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 CORTO00230 105 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 MGST3O14880 152 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 LHX2P50458 406 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 LGALS4P56470 323 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 COX19Q49B96 90 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 OR1L8Q8NGR8 309 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 S4R3C0 116 aa13.16□□□□□ -0.3
USP43-201ENST00000285199 ZADH2Q8N4Q0 377 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 KIR3DL3Q8N743 410 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 A8MWL6 223 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
USP43-201ENST00000285199 GNG5P63218 68 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms