RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CLCC1Q96S66 551 aa15.05■□□□□ -0
PDLIM3-202ENST00000284770 TEX50A0A1B0GTY4 177 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 KANTRA0A1W2PQU2 76 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 FAM24AA6NFZ4 105 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 IAPPP10997 89 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 MYOD1P15172 320 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 TAS2R30P59541 319 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 SSMEM1Q8WWF3 244 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 ARPC5LQ9BPX5 153 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 CDC42EP3Q9UKI2 254 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 PLXNB1O43157 2135 aa15.04■□□□□ -0
PDLIM3-202ENST00000284770 IGSF23A1L1A6 192 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 CAV2P51636 162 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 SCGB2A2Q13296 93 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 TMEM252Q8N6L7 170 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 RASL11BQ9BPW5 248 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 GSX1Q9H4S2 264 aaPredicted RBP15.03■□□□□ -0
PDLIM3-202ENST00000284770 MOB4Q9Y3A3 225 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 ZFHX3Q15911 3703 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 SONP18583 2426 aaKnown RBP15.03■□□□□ -0
PDLIM3-202ENST00000284770 BTBD17A6NE02 478 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 FGF16O43320 207 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 ACTL6BO94805 426 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 OPN1MWP04001 364 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 OPN1MW2P0DN77 364 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 OPN1MW3P0DN78 364 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 RPL23AP62750 156 aaKnown RBP15.03■□□□□ -0
PDLIM3-202ENST00000284770 EWSR1Q01844 656 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM3-202ENST00000284770 TNXAQ16473 311 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 TEX261Q6UWH6 196 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 SLC51BQ86UW2 128 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 SIGLECL1Q8N7X8 197 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 OR1L8Q8NGR8 309 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 BSCL2Q96G97 398 aaPredicted RBP15.03■□□□□ -0
PDLIM3-202ENST00000284770 CYTL1Q9NRR1 136 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 U3KQ87 197 aa15.03■□□□□ -0
PDLIM3-202ENST00000284770 CA2P00918 260 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 HIVEP1P15822 2718 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 COMPP49747 757 aaPredicted RBP15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 SSBP2P81877 361 aaPredicted RBP15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 PRCDQ00LT1 54 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 NHLH2Q02577 135 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 SPINK9Q5DT21 86 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 C16orf82Q7Z2V1 217 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 C5orf56Q8N8D9 126 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 DTD1Q8TEA8 209 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 ZC4H2Q9NQZ6 224 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 NDUFA4L2Q9NRX3 87 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 PSENENQ9NZ42 101 aa15.02□□□□□ -0.01
PDLIM3-202ENST00000284770 CEBPZOSA8MTT3 80 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 E7EUB6 86 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 H3BP45 60 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 HOXA3O43365 443 aaPredicted RBP15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 CFDP00746 253 aaPredicted RBP15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 GNB1P62873 340 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 ZNF562Q6V9R5 426 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 Q71RC1 249 aaPredicted RBP15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 SLC25A31Q9H0C2 315 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 FBXL17Q9UF56 701 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 MXRA5Q9NR99 2828 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 M0QZK8 103 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 HLA-DRB1P01911 266 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 SRD5A1P18405 259 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 C10orf55Q5SWW7 151 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 CIB3Q96Q77 187 aaPredicted RBP15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 HINT2Q9BX68 163 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 VPREB3Q9UKI3 123 aa15.01□□□□□ -0.01
PDLIM3-202ENST00000284770 HIVEP2P31629 2446 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 CGB1A6NKQ9 187 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 TAAR5O14804 337 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 CNIH1O95406 144 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 AMY1AP04745 511 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 VDAC2P45880 294 aaPredicted RBP15□□□□□ -0.01
PDLIM3-202ENST00000284770 RPL27AP46776 148 aaKnown RBP15□□□□□ -0.01
PDLIM3-202ENST00000284770 BAXQ07812 192 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 RBMS3Q6XE24 437 aaKnown RBP15□□□□□ -0.01
PDLIM3-202ENST00000284770 ZNF680Q8NEM1 530 aa15□□□□□ -0.01
PDLIM3-202ENST00000284770 ZNF471Q9BX82 626 aaPredicted RBP15□□□□□ -0.01
PDLIM3-202ENST00000284770 A0A1B0GW64 132 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 LY86O95711 162 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 HOXA1P49639 335 aaPredicted RBP14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 CX3CL1P78423 397 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 FXYD3Q14802 87 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 TMEM14EPQ6UXP3 125 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 SRSF12Q8WXF0 261 aaKnown RBP14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 HIPK2Q9H2X6 1198 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 PLEKHA3Q9HB20 300 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 TNFRSF19Q9NS68 423 aa14.99□□□□□ -0.01
PDLIM3-202ENST00000284770 CST7O76096 145 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 SULT1A1P50225 295 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 UBA52P62987 128 aaKnown RBP14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 SPANXN5Q5MJ07 72 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 TMEM86BQ8N661 226 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 STOML3Q8TAV4 291 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 ST8SIA2Q92186 375 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 SMIM3Q9BZL3 60 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 ENY2Q9NPA8 101 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 ANK3Q12955 4377 aaKnown RBP14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 IGHV7-81A0A0B4J1V7 117 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 A0A1W2PN81 502 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms