RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ARL14EPLP0DKL9 152 aa20.53■□□□□ 0.88
ROM1-201ENST00000278833 PDLIM4P50479 330 aa20.53■□□□□ 0.88
ROM1-201ENST00000278833 ACTL10Q5JWF8 245 aa20.53■□□□□ 0.88
ROM1-201ENST00000278833 GFI1BQ5VTD9 330 aa20.53■□□□□ 0.88
ROM1-201ENST00000278833 CCKARP32238 428 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRR20EP86478 221 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRR20CP86479 221 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRR20DP86480 221 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRR20BP86481 221 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRR20AP86496 221 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 PRCDQ00LT1 54 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 RAB31Q13636 194 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 LYG1Q8N1E2 194 aa20.52■□□□□ 0.88
ROM1-201ENST00000278833 hADV38S2A0JD32 116 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 UPK2O00526 184 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 RHOBP62745 196 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 MEF2CQ06413 473 aaPredicted RBP20.52■□□□□ 0.87
ROM1-201ENST00000278833 DUX4L9Q6RFH8 374 aaPredicted RBP20.52■□□□□ 0.87
ROM1-201ENST00000278833 TMEM144Q7Z5S9 345 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 RNASEH2CQ8TDP1 164 aaKnown RBP20.52■□□□□ 0.87
ROM1-201ENST00000278833 C11orf52Q96A22 123 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 ELOVL1Q9BW60 279 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 PATZ1Q9HBE1 687 aaKnown RBP20.52■□□□□ 0.87
ROM1-201ENST00000278833 ELOVL5Q9NYP7 299 aa20.52■□□□□ 0.87
ROM1-201ENST00000278833 FAM208BQ5VWN6 2430 aa20.51■□□□□ 0.87
ROM1-201ENST00000278833 PRRC2CQ9Y520 2896 aaKnown RBP20.51■□□□□ 0.87
ROM1-201ENST00000278833 SFTPCP11686 197 aa20.51■□□□□ 0.87
ROM1-201ENST00000278833 IRF2P14316 349 aa20.51■□□□□ 0.87
ROM1-201ENST00000278833 LEAP2Q969E1 77 aa20.51■□□□□ 0.87
ROM1-201ENST00000278833 BET1LQ9NYM9 111 aa20.51■□□□□ 0.87
ROM1-201ENST00000278833 SLC25A10Q9UBX3 287 aaPredicted RBP20.51■□□□□ 0.87
ROM1-201ENST00000278833 NKX6-3A6NJ46 265 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 CA2P00918 260 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 IGHV3-7P01780 117 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 HIST1H1BP16401 226 aaKnown RBP20.5■□□□□ 0.87
ROM1-201ENST00000278833 RTL8BQ17RB0 113 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 ZNF833PQ6ZTB9 187 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 BBC3Q96PG8 261 aaPredicted RBP20.5■□□□□ 0.87
ROM1-201ENST00000278833 OR51B2Q9Y5P1 312 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 LY96Q9Y6Y9 160 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 MT-CO2P00403 227 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 TNFRSF1AP19438 455 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 GCHFRP30047 84 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 FAM27E3Q08E93 113 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 FOXL1Q12952 345 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 CST9LP1Q5W188 147 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 TMEM108Q6UXF1 575 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 STPG3Q8N7X2 389 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 OR1P1Q8NH06 330 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 CCL13Q99616 98 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 HIST1H2BLQ99880 126 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 FKBP11Q9NYL4 201 aa20.5■□□□□ 0.87
ROM1-201ENST00000278833 CT45A6P0DMU7 189 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 CT45A5P0DMU8 189 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 CT45A7P0DMV0 189 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 AREGP15514 252 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 EFNB3Q15768 340 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 ALKBH2Q6NS38 261 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 FAM216BQ8N7L0 139 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 NECAP1Q8NC96 275 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 PCGF1Q9BSM1 259 aa20.49■□□□□ 0.87
ROM1-201ENST00000278833 INS-IGF2F8WCM5 200 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 NDUFB4O95168 129 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 C4orf17Q53FE4 359 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 C2orf83Q53S99 150 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 PNKDQ8N490 385 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 SLC35D1Q9NTN3 355 aa20.48■□□□□ 0.87
ROM1-201ENST00000278833 A0A1W2PPQ1 181 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 UBE2G2P60604 165 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 SSX2Q16385 188 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 FAM71F2Q6NXP2 309 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 C22orf34Q6ZV56 151 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 OR5B3Q8NH48 314 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 GAL3ST2Q9H3Q3 398 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 PLEKHA3Q9HB20 300 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 TRAV9-1A0A075B6T8 112 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 OR1L8Q8NGR8 309 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 OR5R1Q8NH85 324 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 OSR1Q8TAX0 266 aaPredicted RBP20.47■□□□□ 0.87
ROM1-201ENST00000278833 SLC35E1Q96K37 410 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 PACRGQ96M98 296 aaPredicted RBP20.47■□□□□ 0.87
ROM1-201ENST00000278833 PFDN5Q99471 154 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 DYSFO75923 2080 aa20.47■□□□□ 0.87
ROM1-201ENST00000278833 C9JCJ5 164 aa20.46■□□□□ 0.87
ROM1-201ENST00000278833 DVL1O14640 695 aa20.46■□□□□ 0.87
ROM1-201ENST00000278833 C8orf31Q8N9H6 132 aa20.46■□□□□ 0.87
ROM1-201ENST00000278833 RALYQ9UKM9 306 aaKnown RBP20.46■□□□□ 0.87
ROM1-201ENST00000278833 SLC45A2Q9UMX9 530 aa20.46■□□□□ 0.87
ROM1-201ENST00000278833 LINC00869P0C866 280 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 FABP4P15090 132 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 ZNF596Q8TC21 504 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 PRDM13Q9H4Q3 707 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 C17orf100A8MU93 164 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 J3QR06 171 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 MMP23AO75900 390 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 TDGF1P3P51864 188 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 LURAP1LQ8IV03 231 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 SSMEM1Q8WWF3 244 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 SFRP2Q96HF1 295 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 C19orf24Q9BVV8 132 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms