RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 OR5AC2Q9NZP5 309 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 H3BUX3 64 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 TMEM170BQ5T4T1 132 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 TRBV20OR9-2A0A075B6H5 130 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 ASIPP42127 132 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
SHANK3-201ENST00000262795 WDR82Q6UXN9 313 aa13.38□□□□□ -0.27
SHANK3-201ENST00000262795 ARL14EPLP0DKL9 152 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 OR5P3Q8WZ94 311 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 MAP1LC3AQ9H492 121 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 C21orf62Q9NYP8 219 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 NDUFB4O95168 129 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 CHRNA10Q9GZZ6 450 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 NXT2Q9NPJ8 142 aaKnown RBP13.37□□□□□ -0.27
SHANK3-201ENST00000262795 ESPL1Q14674 2120 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 IRF3Q14653 427 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 RPRMQ9NS64 109 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 LINC01356Q8N9X3 169 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 ZNF672Q499Z4 452 aaPredicted RBP13.37□□□□□ -0.27
SHANK3-201ENST00000262795 RAB24Q969Q5 203 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 SDF2L1Q9HCN8 221 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
SHANK3-201ENST00000262795 OGG1O15527 345 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.273e-7■■■■□ 24.7
SHANK3-201ENST00000262795 LHBP01229 141 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 TYMSP04818 313 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 TRAV24A0A0B4J272 114 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 ZP1P60852 638 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 SRSF4Q08170 494 aaKnown RBP13.36□□□□□ -0.27
SHANK3-201ENST00000262795 SAPCD1Q5SSQ6 148 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 TTC9CQ8N5M4 171 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
SHANK3-201ENST00000262795 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 A6NJY4 79 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
SHANK3-201ENST00000262795 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 CYB561D1Q8N8Q1 229 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 GGACTQ9BVM4 153 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 GRIFINA4D1Z8 144 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 PSMG3Q9BT73 122 aaPredicted RBP13.36□□□□□ -0.27
SHANK3-201ENST00000262795 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 RHOGP84095 191 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 NGFRP08138 427 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 DDTP30046 118 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 PTGDSP41222 190 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 SURF2Q15527 256 aaPredicted RBP13.36□□□□□ -0.27
SHANK3-201ENST00000262795 HEATR5BQ9P2D3 2071 aa13.36□□□□□ -0.27
SHANK3-201ENST00000262795 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 KLF4O43474 513 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 SNAI2O43623 268 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 CLDND2Q8NHS1 167 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.35□□□□□ -0.27
SHANK3-201ENST00000262795 TRAV14DV4A0A0A6YYC5 116 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 FBLN7Q53RD9 439 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 FAM89BQ8N5H3 189 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 NEUROG1Q92886 237 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 B4DSR2 109 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 CFHR3Q02985 330 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 ZNF708P17019 499 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 FAM3BP58499 235 aaPredicted RBP13.35□□□□□ -0.27
SHANK3-201ENST00000262795 PSG7Q13046 419 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 PRSS53Q2L4Q9 553 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 ACTL10Q5JWF8 245 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 MESP1Q9BRJ9 268 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 ANAPC13Q9BS18 74 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 DERL1Q9BUN8 251 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 MYOD1P15172 320 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 RAG2P55895 527 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 RTN4RL2Q86UN3 420 aa13.35□□□□□ -0.27
SHANK3-201ENST00000262795 CDK2AP2O75956 126 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 HSPE1P61604 102 aaKnown RBP13.34□□□□□ -0.27
SHANK3-201ENST00000262795 Q5BKY6 102 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 DTX2Q86UW9 622 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 LOC390937A0A1W2PQ73 354 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 EFNA4P52798 201 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 C10orf128Q5T292 105 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 ZNF837Q96EG3 531 aaPredicted RBP13.34□□□□□ -0.27
SHANK3-201ENST00000262795 COX11Q9Y6N1 276 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 RNF114Q9Y508 228 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 BPESC1Q9GZL8 116 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 TRGC1P0CF51 173 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 GPR146Q96CH1 333 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 PKIBQ9C010 78 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 CTDSPLO15194 276 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 OR11H4Q8NGC9 324 aa13.34□□□□□ -0.27
SHANK3-201ENST00000262795 STAG3L3P0CL85 134 aa13.33□□□□□ -0.27
SHANK3-201ENST00000262795 TEX45Q8NA69 505 aa13.33□□□□□ -0.27
SHANK3-201ENST00000262795 OR10S1Q8NGN2 331 aa13.33□□□□□ -0.28
SHANK3-201ENST00000262795 SH3BGRL3Q9H299 93 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms