RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SNAI2O43623 268 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 CEACAM4O75871 244 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 PLPPR1Q8TBJ4 325 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 DICER1Q9UPY3 1922 aaKnown RBP15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 EFEMP2O95967 443 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 WDR82Q6UXN9 313 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 MT-ND6P03923 174 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 PPP1R27Q86WC6 154 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 KIR3DL3Q8N743 410 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 IMMP2LQ96T52 175 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 YAE1D1Q9NRH1 226 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 SCO2A0A1W2PP80 73 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 LEMD1Q68G75 181 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 LHFPL5Q8TAF8 219 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 WFDC12Q8WWY7 111 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 ANKRD36A6QL64 1941 aa15.74■□□□□ 0.11
SMARCC1-201ENST00000254480 ZNF98A6NK75 572 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 SIAH2O43255 324 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 SMDT1Q9H4I9 107 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 TMEM160Q9NX00 188 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 A0A0G2JK05 382 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 TRGC1P0CF51 173 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 CDC42EP3Q9UKI2 254 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 CHD5Q8TDI0 1954 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 MRPL14Q6P1L8 145 aaKnown RBP15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 RCC1LQ96I51 464 aaKnown RBP15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 CXorf65A6NEN9 183 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 NPIPB9F8W1W9 429 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 SDHCQ99643 169 aaPredicted RBP15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 IFI27L2Q9H2X8 130 aa15.73■□□□□ 0.11
SMARCC1-201ENST00000254480 A0A0B4J293 547 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 IFI6P09912 130 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 M0QZK8 103 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 GGCTO75223 188 aaKnown RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 NBEAP1P0C6P0 100 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 ATP5G3P48201 142 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 OR13C6PQ8NH95 151 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 RTBDNQ9BSG5 229 aaPredicted RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 GEMIN7Q9H840 131 aaKnown RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 LINC00527Q9UJ94 153 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 KBTBD11-OT1A0A1B0GTJ5 212 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 NPFFO15130 113 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 UCP3P55916 312 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 SUMO2P61956 95 aaKnown RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 OR10S1Q8NGN2 331 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 CLDND2Q8NHS1 167 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 KCNS1Q96KK3 526 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 RNASE4P34096 147 aaKnown RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 RBBP6Q7Z6E9 1792 aaKnown RBP15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 NAT1P18440 290 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 TEX45Q8NA69 505 aa15.72■□□□□ 0.11
SMARCC1-201ENST00000254480 ARPC1AQ92747 370 aa15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 C1QTNF5Q9BXJ0 243 aa15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 MIR17HGQ75NE6 70 aa15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 TSPOP30536 169 aa15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 SPRR3Q9UBC9 169 aa15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 ZNF256Q9Y2P7 627 aaPredicted RBP15.71■□□□□ 0.11
SMARCC1-201ENST00000254480 C17orf100A8MU93 164 aa15.71■□□□□ 0.1
SMARCC1-201ENST00000254480 FGFBP3Q8TAT2 258 aa15.71■□□□□ 0.1
SMARCC1-201ENST00000254480 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.1
SMARCC1-201ENST00000254480 SMAGPQ0VAQ4 97 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 DUX3Q96PT4 197 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 RALGAPA1Q6GYQ0 2036 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 GAGE10A6NGK3 116 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 TRAV8-6A0A0B4J262 113 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 TMEM170BQ5T4T1 132 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 TCF24Q7RTU0 167 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 CBLN4Q9NTU7 201 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 SCGB1A1P11684 91 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 NHLRC3Q5JS37 347 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 LYZL4Q96KX0 146 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 C21orf62Q9NYP8 219 aa15.7■□□□□ 0.1
SMARCC1-201ENST00000254480 DOPEY2Q9Y3R5 2298 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 SRD5A1P18405 259 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 COL5A1-AS1Q5SY13 56 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 OR10AG1Q8NH19 301 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 MED12Q93074 2177 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 IGKV3D-20A0A0C4DH25 116 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 FOXG1P55316 489 aaPredicted RBP15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 ST6GALNAC6Q969X2 333 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 KIR2DL4Q99706 377 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 MRPL32Q9BYC8 188 aaKnown RBP15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 A0A1B0GTI1 187 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 CD55P08174 381 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 RPS20P60866 119 aaKnown RBP15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 FOXF2Q12947 444 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 TXNDC17Q9BRA2 123 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 SAA2-SAA4A0A096LPE2 208 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 IGKV1D-13A0A0B4J2D9 117 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 NPIPB13A6NJU9 1138 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 NPIPB4C9JG80 1138 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 SAA2P0DJI9 122 aaPredicted RBP15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 IGKV1-13P0DP09 117 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 RAMP3O60896 148 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 GNG5P63218 68 aa15.69■□□□□ 0.1
SMARCC1-201ENST00000254480 TM2D1Q9BX74 207 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 FOLR2P14207 255 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms