RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-220ENST00000641570 hCG_2014768A0A024R1R8 64 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 L7N2F9 121 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 CCSO14618 274 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 OPN1MWP04001 364 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 RLN2P04090 185 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 TRAPPC2P0DI81 140 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 TRAPPC2BP0DI82 140 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 OPN1MW2P0DN77 364 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 OPN1MW3P0DN78 364 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 SLC25A6P12236 298 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 DEFA4P12838 97 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 COMPP49747 757 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-220ENST00000641570 S100A10P60903 97 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 VAMP2P63027 116 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 RPP30P78346 268 aaKnown RBP10.3□□□□□ -0.76
PHGDH-220ENST00000641570 ERHP84090 104 aaKnown RBP10.3□□□□□ -0.76
PHGDH-220ENST00000641570 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 HSD17B13Q7Z5P4 300 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-220ENST00000641570 CADM3Q8N126 398 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 TPSG1Q9NRR2 321 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 COA4Q9NYJ1 87 aa10.3□□□□□ -0.76
PHGDH-220ENST00000641570 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 NXPH3O95157 252 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 LY86O95711 162 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 OR9G9P0C7N8 305 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 SNCAP37840 140 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 SUB1P53999 127 aaKnown RBP eCLIP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 SPCS3P61009 180 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 CX3CL1P78423 397 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 OR5M8Q8NGP6 311 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 RBMXL1Q96E39 390 aaKnown RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 C2orf50Q96LR7 162 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 PLSCR3Q9NRY6 295 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 ZNF355PQ9NSJ1 428 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
PHGDH-220ENST00000641570 SONP18583 2426 aaKnown RBP10.29□□□□□ -0.76
PHGDH-220ENST00000641570 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
PHGDH-220ENST00000641570 BLCAPP62952 87 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 RELBQ01201 579 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 IZUMO4Q1ZYL8 232 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 UNQ5815/PRO19632Q6UWF5 114 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 LURAP1LQ8IV03 231 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 ZBTB8BQ8NAP8 495 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-220ENST00000641570 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-220ENST00000641570 TMEM14BQ9NUH8 114 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 PAIP2BQ9ULR5 123 aaKnown RBP10.28□□□□□ -0.76
PHGDH-220ENST00000641570 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
PHGDH-220ENST00000641570 IGHV7-81A0A0B4J1V7 117 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 MSGN1A6NI15 193 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 DBX1A6NMT0 343 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 ATP6V0E1O15342 81 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 CRYGBP07316 175 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 FGL1Q08830 312 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 PJVKQ0ZLH3 352 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 TMEM65Q6PI78 240 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-220ENST00000641570 OR52E5Q8NH55 327 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
PHGDH-220ENST00000641570 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
PHGDH-220ENST00000641570 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.77
PHGDH-220ENST00000641570 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 A0A0B4J293 547 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 TEX50A0A1B0GTY4 177 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 FCN1O00602 326 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 SSSCA1O60232 199 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 TSPAN9O75954 239 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 IGHG2P01859 326 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-220ENST00000641570 BCAP31P51572 246 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 TNFRSF9Q07011 255 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 FCN2Q15485 313 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 C10orf55Q5SWW7 151 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 Q6ZNX1 250 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 OR4X2Q8NGF9 303 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
PHGDH-220ENST00000641570 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms